Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular, plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 1
- extracellular 5
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 5
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY16125 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 85.38 | 85.38 |
| CDY33785 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 84.43 | 84.43 |
| Bra026866.1-P | Field mustard | endoplasmic reticulum, extracellular, plasma membrane | 84.43 | 84.43 |
| CDX96872 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 83.02 | 82.63 |
| CDY62212 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 82.55 | 82.16 |
| Bra016715.1-P | Field mustard | endoplasmic reticulum, extracellular, vacuole | 66.98 | 70.65 |
| AT2G03290.1 | Thale cress | extracellular | 68.4 | 68.08 |
| AT1G26690.1 | Thale cress | endoplasmic reticulum, extracellular, vacuole | 66.98 | 66.36 |
| AT2G03040.1 | Thale cress | extracellular | 50.0 | 63.86 |
| VIT_01s0182g00030.t01 | Wine grape | endoplasmic reticulum, extracellular, plasma membrane | 61.32 | 61.32 |
| AT1G69460.1 | Thale cress | endoplasmic reticulum, extracellular, vacuole | 61.79 | 61.22 |
| GSMUA_Achr1P21760_001 | Banana | cytosol | 48.58 | 60.95 |
| GSMUA_AchrUn_... | Banana | cytosol | 48.58 | 60.95 |
| KRH50555 | Soybean | endoplasmic reticulum | 63.21 | 60.63 |
| Solyc05g013130.2.1 | Tomato | endoplasmic reticulum, extracellular, vacuole | 58.96 | 58.69 |
| KRG89554 | Soybean | endoplasmic reticulum | 60.85 | 58.64 |
| PGSC0003DMT400073002 | Potato | extracellular | 58.02 | 57.75 |
| PGSC0003DMT400007416 | Potato | endoplasmic reticulum, extracellular, vacuole | 57.55 | 57.01 |
| PGSC0003DMT400062438 | Potato | mitochondrion | 58.02 | 56.94 |
| Solyc04g005570.2.1 | Tomato | endoplasmic reticulum, plasma membrane, vacuole | 57.08 | 56.28 |
| Solyc01g010940.2.1 | Tomato | nucleus, plastid | 56.13 | 55.09 |
| KRH70788 | Soybean | extracellular | 35.85 | 53.15 |
| EER92205 | Sorghum | endoplasmic reticulum, extracellular, plasma membrane | 52.83 | 52.34 |
| Os07t0632700-01 | Rice | plasma membrane | 56.6 | 52.17 |
| TraesCS2B01G180800.1 | Wheat | mitochondrion | 55.66 | 51.75 |
| TraesCS2D01G161400.1 | Wheat | endoplasmic reticulum, plastid | 55.19 | 51.32 |
| Zm00001d022238_P001 | Maize | mitochondrion | 55.19 | 51.09 |
| TraesCS2A01G155600.1 | Wheat | golgi | 54.72 | 50.88 |
| EER97600 | Sorghum | mitochondrion | 54.72 | 50.66 |
| Os03t0376000-01 | Rice | endoplasmic reticulum, plasma membrane | 54.72 | 50.0 |
| Zm00001d006951_P001 | Maize | mitochondrion | 53.77 | 49.78 |
| KRH70789 | Soybean | cytosol, vacuole | 16.98 | 49.32 |
| HORVU2Hr1G028220.5 | Barley | endoplasmic reticulum, extracellular | 53.3 | 48.71 |
| AT3G29070.1 | Thale cress | mitochondrion | 47.17 | 44.44 |
| AT1G09580.1 | Thale cress | endoplasmic reticulum, golgi, plasma membrane | 40.09 | 39.17 |
| AT1G57620.1 | Thale cress | endoplasmic reticulum, golgi, plasma membrane | 38.68 | 38.68 |
| Zm00001d047163_P001 | Maize | endoplasmic reticulum, extracellular, vacuole | 42.92 | 36.69 |
| AT1G21900.1 | Thale cress | plasma membrane | 36.32 | 35.65 |
| AT3G10780.1 | Thale cress | endoplasmic reticulum, plasma membrane | 33.02 | 32.26 |
Protein Annotations
| MapMan:22.3.5.2 | EntrezGene:837961 | UniProt:A0A178WEE2 | ProteinID:AAD39287.1 | ProteinID:AAF79411.1 | ProteinID:AEE29098.1 |
| EMBL:AK117657 | ArrayExpress:AT1G14010 | EnsemblPlantsGene:AT1G14010 | RefSeq:AT1G14010 | TAIR:AT1G14010 | RefSeq:AT1G14010-TAIR-G |
| EnsemblPlants:AT1G14010.1 | TAIR:AT1G14010.1 | Unigene:At.48185 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005783 | GO:GO:0005789 | GO:GO:0005794 | GO:GO:0006810 | GO:GO:0008150 |
| GO:GO:0015031 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016192 | GO:GO:0032580 | GO:GO:0033116 |
| InterPro:GOLD_dom | InterPro:IPR009038 | RefSeq:NP_172854.1 | ProteinID:OAP16171.1 | PFAM:PF01105 | PO:PO:0000293 |
| PO:PO:0005052 | PFscan:PS50866 | PANTHER:PTHR22811 | PANTHER:PTHR22811:SF47 | UniProt:Q8GYG1 | SMART:SM01190 |
| SignalP:SignalP-noTM | InterPro:TMP21-related | TMHMM:TMhelix | UniParc:UPI00000ADDDF | SEG:seg | : |
Description
Transmembrane emp24 domain-containing protein p24delta7 [Source:UniProtKB/Swiss-Prot;Acc:Q8GYG1]
Coordinates
chr1:-:4800169..4801850
Molecular Weight (calculated)
24156.9 Da
IEP (calculated)
6.796
GRAVY (calculated)
-0.158
Length
212 amino acids
Sequence
(BLAST)
(BLAST)
001: MNHRRSSIVL LILSILSPVT LSIRYELLSG HTKCISEEIH ANAMTIGKYS IINPHEDHPL PSSHKVTVRV TSPQGTAYHE SDGVESGQFS FVAVETGDYI
101: SCFSAVDHKP ETTLIIDFDW RTGIHTKDWS NVAKKSQVET MEFEVKKLFE TVNGIHDEMF YLRDREEEMH NLNIATNSKM AWLSFVSLAV CLSVAGLQFW
201: HLKTFFQKKK LI
101: SCFSAVDHKP ETTLIIDFDW RTGIHTKDWS NVAKKSQVET MEFEVKKLFE TVNGIHDEMF YLRDREEEMH NLNIATNSKM AWLSFVSLAV CLSVAGLQFW
201: HLKTFFQKKK LI
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.