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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, extracellular, plasma membrane

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 6
  • vacuole 5
  • plasma membrane 7
  • golgi 5
  • mitochondrion 1
  • plastid 1
  • cytosol 1
  • nucleus 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, extracellular, plasma membrane
Any Predictor:cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Plant-mPloc:cytosol, mitochondrion, nucleus, plasma membrane, plastid
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY33785 Canola endoplasmic reticulum, extracellular, plasma membrane 100.0 100.0
AT1G14010.1 Thale cress endoplasmic reticulum, extracellular, plasma membrane 84.43 84.43
Bra016715.1-P Field mustard endoplasmic reticulum, extracellular, vacuole 75.0 79.1
Bra024781.1-P Field mustard endoplasmic reticulum, extracellular 73.11 72.43
Bra026559.1-P Field mustard endoplasmic reticulum, extracellular, vacuole 73.11 71.76
GSMUA_Achr1P21760_001 Banana cytosol 51.89 65.09
GSMUA_AchrUn_... Banana cytosol 50.47 63.31
VIT_01s0182g00030.t01 Wine grape endoplasmic reticulum, extracellular, plasma membrane 63.21 63.21
KRH50555 Soybean endoplasmic reticulum 65.57 62.9
Bra024694.1-P Field mustard endoplasmic reticulum, plasma membrane 63.21 62.62
Bra004382.1-P Field mustard endoplasmic reticulum, extracellular, vacuole 63.21 62.33
Bra016283.1-P Field mustard endoplasmic reticulum 62.74 62.15
KRG89554 Soybean endoplasmic reticulum 63.68 61.36
PGSC0003DMT400007416 Potato endoplasmic reticulum, extracellular, vacuole 60.38 59.81
PGSC0003DMT400062438 Potato mitochondrion 60.85 59.72
Solyc05g013130.2.1 Tomato endoplasmic reticulum, extracellular, vacuole 59.43 59.15
PGSC0003DMT400073002 Potato extracellular 58.96 58.69
Solyc04g005570.2.1 Tomato endoplasmic reticulum, plasma membrane, vacuole 59.43 58.6
Solyc01g010940.2.1 Tomato nucleus, plastid 58.96 57.87
EER92205 Sorghum endoplasmic reticulum, extracellular, plasma membrane 55.66 55.14
Os07t0632700-01 Rice plasma membrane 58.96 54.35
TraesCS2B01G180800.1 Wheat mitochondrion 57.55 53.51
Zm00001d022238_P001 Maize mitochondrion 57.55 53.28
TraesCS2D01G161400.1 Wheat endoplasmic reticulum, plastid 57.08 53.07
EER97600 Sorghum mitochondrion 57.08 52.84
TraesCS2A01G155600.1 Wheat golgi 56.6 52.63
Zm00001d006951_P001 Maize mitochondrion 56.13 51.97
Bra033081.1-P Field mustard golgi, plasma membrane, plastid 54.25 51.8
HORVU2Hr1G028220.5 Barley endoplasmic reticulum, extracellular 56.13 51.29
Bra036221.1-P Field mustard endoplasmic reticulum, extracellular 51.89 50.93
KRH70789 Soybean cytosol, vacuole 17.45 50.68
Os03t0376000-01 Rice endoplasmic reticulum, plasma membrane 55.19 50.43
KRH70788 Soybean extracellular 33.96 50.35
Zm00001d047163_P001 Maize endoplasmic reticulum, extracellular, vacuole 46.23 39.52
Bra020010.1-P Field mustard endoplasmic reticulum, extracellular, golgi 37.26 37.26
Bra001380.1-P Field mustard endoplasmic reticulum, extracellular, plasma membrane 37.26 36.41
Bra030786.1-P Field mustard extracellular 35.85 36.02
Bra029868.1-P Field mustard plasma membrane 34.91 35.24
Bra016401.1-P Field mustard endoplasmic reticulum, extracellular, plasma membrane 39.62 34.71
Bra027911.1-P Field mustard endoplasmic reticulum, extracellular, plasma membrane 34.91 34.26
Bra038147.1-P Field mustard endoplasmic reticulum, extracellular, plasma membrane 34.43 33.95
Bra034146.1-P Field mustard endoplasmic reticulum, extracellular, plasma membrane 31.13 33.5
Bra017957.1-P Field mustard endoplasmic reticulum, golgi, vacuole 25.0 17.04
Protein Annotations
MapMan:22.3.5.2EnsemblPlantsGene:Bra026866EnsemblPlants:Bra026866.1EnsemblPlants:Bra026866.1-PGO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0005737GO:GO:0005783GO:GO:0005789GO:GO:0016020GO:GO:0016021
InterPro:GOLD_domInterPro:IPR009038UniProt:M4EDK6PFAM:PF01105PFscan:PS50866PANTHER:PTHR22811
PANTHER:PTHR22811:SF47SMART:SM01190SignalP:SignalP-noTMInterPro:TMP21-relatedTMHMM:TMhelixUniParc:UPI0002542E20
SEG:seg:::::
Description
AT1G14010 (E=3e-098) | emp24/gp25L/p24 family protein
Coordinates
chrA09:+:34038287..34039152
Molecular Weight (calculated)
24110.9 Da
IEP (calculated)
6.418
GRAVY (calculated)
-0.200
Length
212 amino acids
Sequence
(BLAST)
001: MDLRRSSIVL LILSILSPAT LSMRYELLSG HTKCISEEIH ANAMSVGKYS IVNPNDDHPL PDSHKITVRV TSPQGTAYHE ADGVSTGQFS LTAVETGDYI
101: TCISAVDHKP ETMLTIDFDW RSGVHTKDWS NVAKKSQVEM MEFEVKKLFD TVTSIHDEMF YLRDREEEMQ ELNRATNTKM AWFSFLSLGV CLSVAGLQFW
201: HLKTFFQKKK LI
Best Arabidopsis Sequence Match ( AT1G14010.1 )
(BLAST)
001: MNHRRSSIVL LILSILSPVT LSIRYELLSG HTKCISEEIH ANAMTIGKYS IINPHEDHPL PSSHKVTVRV TSPQGTAYHE SDGVESGQFS FVAVETGDYI
101: SCFSAVDHKP ETTLIIDFDW RTGIHTKDWS NVAKKSQVET MEFEVKKLFE TVNGIHDEMF YLRDREEEMH NLNIATNSKM AWLSFVSLAV CLSVAGLQFW
201: HLKTFFQKKK LI
Arabidopsis Description
Transmembrane emp24 domain-containing protein p24delta7 [Source:UniProtKB/Swiss-Prot;Acc:Q8GYG1]
SUBAcon: [endoplasmic reticulum,extracellular,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.