Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular, vacuole
Predictor Summary:
Predictor Summary:
- plastid 2
- extracellular 5
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 4
- golgi 4
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400073002 | Potato | extracellular | 96.24 | 96.24 |
| Solyc04g005570.2.1 | Tomato | endoplasmic reticulum, plasma membrane, vacuole | 74.18 | 73.49 |
| CDY37184 | Canola | endoplasmic reticulum, peroxisome, plastid | 16.9 | 72.0 |
| Solyc01g010940.2.1 | Tomato | nucleus, plastid | 72.3 | 71.3 |
| KRH50555 | Soybean | endoplasmic reticulum | 69.01 | 66.52 |
| VIT_01s0182g00030.t01 | Wine grape | endoplasmic reticulum, extracellular, plasma membrane | 62.91 | 63.21 |
| KRG89554 | Soybean | endoplasmic reticulum | 65.26 | 63.18 |
| GSMUA_Achr1P21760_001 | Banana | cytosol | 49.77 | 62.72 |
| GSMUA_AchrUn_... | Banana | cytosol | 49.3 | 62.13 |
| AT1G26690.1 | Thale cress | endoplasmic reticulum, extracellular, vacuole | 61.5 | 61.22 |
| CDX95934 | Canola | vacuole | 61.5 | 60.93 |
| CDY16181 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 61.03 | 60.75 |
| Bra004382.1-P | Field mustard | endoplasmic reticulum, extracellular, vacuole | 61.03 | 60.47 |
| Bra024694.1-P | Field mustard | endoplasmic reticulum, plasma membrane | 60.56 | 60.28 |
| CDX85047 | Canola | endoplasmic reticulum | 60.56 | 60.28 |
| CDY40925 | Canola | endoplasmic reticulum | 60.56 | 60.0 |
| Bra026866.1-P | Field mustard | endoplasmic reticulum, extracellular, plasma membrane | 59.15 | 59.43 |
| CDY33785 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 59.15 | 59.43 |
| AT1G69460.1 | Thale cress | endoplasmic reticulum, extracellular, vacuole | 59.62 | 59.35 |
| AT1G14010.1 | Thale cress | endoplasmic reticulum, extracellular, plasma membrane | 58.69 | 58.96 |
| CDY16125 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 58.69 | 58.96 |
| CDX96872 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 57.75 | 57.75 |
| CDY24142 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 57.75 | 57.48 |
| CDY62212 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 57.28 | 57.28 |
| Bra016283.1-P | Field mustard | endoplasmic reticulum | 56.34 | 56.07 |
| CDY61620 | Canola | endoplasmic reticulum | 56.34 | 56.07 |
| Zm00001d022238_P001 | Maize | mitochondrion | 59.62 | 55.46 |
| EER92205 | Sorghum | endoplasmic reticulum, extracellular, plasma membrane | 55.4 | 55.14 |
| EER97600 | Sorghum | mitochondrion | 59.15 | 55.02 |
| Zm00001d006951_P001 | Maize | mitochondrion | 58.22 | 54.15 |
| Os07t0632700-01 | Rice | plasma membrane | 57.75 | 53.48 |
| KRH70788 | Soybean | extracellular | 35.68 | 53.15 |
| AT2G03290.1 | Thale cress | extracellular | 53.05 | 53.05 |
| TraesCS2B01G180800.1 | Wheat | mitochondrion | 56.34 | 52.63 |
| TraesCS2A01G155600.1 | Wheat | golgi | 55.87 | 52.19 |
| CDY03005 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 52.11 | 51.87 |
| Bra026559.1-P | Field mustard | endoplasmic reticulum, extracellular, vacuole | 52.58 | 51.85 |
| CDY09334 | Canola | endoplasmic reticulum, extracellular, vacuole | 52.11 | 51.39 |
| TraesCS2D01G161400.1 | Wheat | endoplasmic reticulum, plastid | 54.93 | 51.32 |
| Os03t0376000-01 | Rice | endoplasmic reticulum, plasma membrane | 55.87 | 51.29 |
| HORVU2Hr1G028220.5 | Barley | endoplasmic reticulum, extracellular | 55.87 | 51.29 |
| Bra024781.1-P | Field mustard | endoplasmic reticulum, extracellular | 51.17 | 50.93 |
| CDY45170 | Canola | endoplasmic reticulum, extracellular | 51.17 | 50.93 |
| CDY53680 | Canola | endoplasmic reticulum, extracellular, vacuole | 51.64 | 50.93 |
| AT2G03040.1 | Thale cress | extracellular | 36.62 | 46.99 |
| Bra016715.1-P | Field mustard | endoplasmic reticulum, extracellular, vacuole | 43.19 | 45.77 |
| KRH70789 | Soybean | cytosol, vacuole | 15.49 | 45.21 |
| Zm00001d047163_P001 | Maize | endoplasmic reticulum, extracellular, vacuole | 45.54 | 39.11 |
| Solyc11g013000.1.1 | Tomato | plastid | 38.5 | 39.05 |
| Solyc10g045640.1.1 | Tomato | endoplasmic reticulum, extracellular, plasma membrane | 36.15 | 35.98 |
| Solyc06g060440.1.1 | Tomato | endoplasmic reticulum, extracellular, plasma membrane | 35.21 | 35.21 |
| Solyc01g104220.2.1 | Tomato | endoplasmic reticulum | 34.74 | 34.91 |
| Solyc06g060450.2.1 | Tomato | endoplasmic reticulum, extracellular, plasma membrane | 33.33 | 33.02 |
| Solyc06g060430.1.1 | Tomato | cytosol | 12.21 | 28.26 |
Protein Annotations
| MapMan:22.3.5.2 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005783 |
| GO:GO:0005789 | GO:GO:0016020 | GO:GO:0016021 | InterPro:GOLD_dom | InterPro:IPR009038 | UniProt:K4BY34 |
| PFAM:PF01105 | PFscan:PS50866 | PANTHER:PTHR22811 | PANTHER:PTHR22811:SF47 | SMART:SM01190 | SignalP:SignalP-noTM |
| EnsemblPlantsGene:Solyc05g013130.2 | EnsemblPlants:Solyc05g013130.2.1 | InterPro:TMP21-related | TMHMM:TMhelix | UniParc:UPI0002765CBA | SEG:seg |
Description
No Description!
Coordinates
chr5:-:6223649..6227060
Molecular Weight (calculated)
24271.3 Da
IEP (calculated)
6.881
GRAVY (calculated)
-0.136
Length
213 amino acids
Sequence
(BLAST)
(BLAST)
001: MIQRRNIQWV VVILGFIASQ VESLRFDLQS GLTKCIAEDI KSHAMTVGKY QIVNPNEGYP LPDTHKVTVR VTSTYGNTYH QGDNVVEGHF AFEAAEAGDY
101: MTCFFAADHK PPVTLSLDFD WRTGVAAKDW TSVAKKGSVE IMEFELKKIL ENVKAIHDEM FFLREREAEM QELNRSTNSK MAWMTGLSIF LCLGVAGLQL
201: WHLKTFFEKK KLI
101: MTCFFAADHK PPVTLSLDFD WRTGVAAKDW TSVAKKGSVE IMEFELKKIL ENVKAIHDEM FFLREREAEM QELNRSTNSK MAWMTGLSIF LCLGVAGLQL
201: WHLKTFFEKK KLI
001: MFLRSLNLCT ILLFLAISSQ VSQSLHFELQ SGRTKCISED IKSNSMTVGK YTVVNPNEAH PSPQSHKISI RVTSSYGNTY HHAEDVESGQ FAFTAVESGD
101: YMACYTAVDH KPEVTLSIDF DWRTGVQSKS WSSVAKKSQV EVMEFDVKRL IETVNSIHEE MFYLREREEE MQNLNRATNS KMAWLSFLSL FVCLGVAGMQ
201: FVHLKTFFEK KKVI
101: YMACYTAVDH KPEVTLSIDF DWRTGVQSKS WSSVAKKSQV EVMEFDVKRL IETVNSIHEE MFYLREREEE MQNLNRATNS KMAWLSFLSL FVCLGVAGMQ
201: FVHLKTFFEK KKVI
Arabidopsis Description
Transmembrane emp24 domain-containing protein p24delta9 [Source:UniProtKB/Swiss-Prot;Acc:Q9LQY3]
SUBAcon: [endoplasmic reticulum,extracellular,vacuole]
SUBAcon: [endoplasmic reticulum,extracellular,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.