Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular, plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 6
- vacuole 5
- plasma membrane 6
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY45170 | Canola | endoplasmic reticulum, extracellular | 97.2 | 97.2 |
| CDY37184 | Canola | endoplasmic reticulum, peroxisome, plastid | 19.16 | 82.0 |
| CDY33785 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 72.9 | 73.58 |
| AT2G03290.1 | Thale cress | extracellular | 72.9 | 73.24 |
| CDX96872 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 72.43 | 72.77 |
| CDY62212 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 71.96 | 72.3 |
| CDY09334 | Canola | endoplasmic reticulum, extracellular, vacuole | 72.43 | 71.76 |
| CDY16125 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 71.03 | 71.7 |
| CDY53680 | Canola | endoplasmic reticulum, extracellular, vacuole | 71.96 | 71.3 |
| AT2G03040.1 | Thale cress | extracellular | 54.67 | 70.48 |
| GSMUA_Achr1P21760_001 | Banana | cytosol | 47.66 | 60.35 |
| GSMUA_AchrUn_... | Banana | cytosol | 47.66 | 60.35 |
| CDY40925 | Canola | endoplasmic reticulum | 60.28 | 60.0 |
| CDX95934 | Canola | vacuole | 59.35 | 59.07 |
| CDY16181 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 58.41 | 58.41 |
| CDX85047 | Canola | endoplasmic reticulum | 57.94 | 57.94 |
| VIT_01s0182g00030.t01 | Wine grape | endoplasmic reticulum, extracellular, plasma membrane | 57.01 | 57.55 |
| KRH50555 | Soybean | endoplasmic reticulum | 58.41 | 56.56 |
| CDY61620 | Canola | endoplasmic reticulum | 56.07 | 56.07 |
| PGSC0003DMT400007416 | Potato | endoplasmic reticulum, extracellular, vacuole | 56.07 | 56.07 |
| KRG89554 | Soybean | endoplasmic reticulum | 57.01 | 55.45 |
| Solyc04g005570.2.1 | Tomato | endoplasmic reticulum, plasma membrane, vacuole | 55.61 | 55.35 |
| CDY24142 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 55.14 | 55.14 |
| CDY00102 | Canola | cytosol | 42.99 | 54.44 |
| EER92205 | Sorghum | endoplasmic reticulum, extracellular, plasma membrane | 53.74 | 53.74 |
| PGSC0003DMT400062438 | Potato | mitochondrion | 52.8 | 52.31 |
| Solyc05g013130.2.1 | Tomato | endoplasmic reticulum, extracellular, vacuole | 51.87 | 52.11 |
| PGSC0003DMT400073002 | Potato | extracellular | 51.4 | 51.64 |
| Solyc01g010940.2.1 | Tomato | nucleus, plastid | 51.87 | 51.39 |
| Os07t0632700-01 | Rice | plasma membrane | 53.27 | 49.57 |
| CDY19998 | Canola | endoplasmic reticulum, extracellular | 50.0 | 49.54 |
| CDY44411 | Canola | golgi, plasma membrane, plastid | 50.93 | 49.1 |
| CDX85243 | Canola | mitochondrion | 50.93 | 49.1 |
| TraesCS2B01G180800.1 | Wheat | mitochondrion | 51.87 | 48.68 |
| TraesCS2D01G161400.1 | Wheat | endoplasmic reticulum, plastid | 51.87 | 48.68 |
| Zm00001d022238_P001 | Maize | mitochondrion | 51.87 | 48.47 |
| CDY04053 | Canola | endoplasmic reticulum | 50.47 | 48.43 |
| EER97600 | Sorghum | mitochondrion | 51.4 | 48.03 |
| Os03t0376000-01 | Rice | endoplasmic reticulum, plasma membrane | 51.87 | 47.84 |
| HORVU2Hr1G028220.5 | Barley | endoplasmic reticulum, extracellular | 51.87 | 47.84 |
| TraesCS2A01G155600.1 | Wheat | golgi | 50.93 | 47.81 |
| Zm00001d006951_P001 | Maize | mitochondrion | 50.93 | 47.6 |
| KRH70788 | Soybean | extracellular | 29.91 | 44.76 |
| KRH70789 | Soybean | cytosol, vacuole | 14.95 | 43.84 |
| Zm00001d047163_P001 | Maize | endoplasmic reticulum, extracellular, vacuole | 42.06 | 36.29 |
| CDY04681 | Canola | endoplasmic reticulum | 35.51 | 36.19 |
| CDY00971 | Canola | plasma membrane | 34.58 | 35.24 |
| CDY08577 | Canola | plasma membrane | 34.58 | 35.24 |
| CDX73903 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 33.64 | 34.62 |
| CDX73906 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 33.64 | 34.62 |
| CDY00701 | Canola | plasma membrane | 33.64 | 34.62 |
| CDY39938 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 34.11 | 33.8 |
| CDX95293 | Canola | endoplasmic reticulum, extracellular, golgi | 34.11 | 33.8 |
| CDX96570 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 35.98 | 33.05 |
| CDY23801 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 33.18 | 33.02 |
| CDY31789 | Canola | plasma membrane | 33.18 | 33.02 |
| CDY38827 | Canola | endoplasmic reticulum, extracellular, vacuole | 35.98 | 32.35 |
| CDX93498 | Canola | endoplasmic reticulum, golgi, plasma membrane | 33.64 | 32.14 |
| CDY50894 | Canola | endoplasmic reticulum, golgi, plasma membrane | 33.18 | 31.7 |
| CDY08168 | Canola | endoplasmic reticulum | 24.3 | 31.52 |
| CDY36275 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 28.97 | 31.47 |
| CDY20688 | Canola | endoplasmic reticulum, golgi, nucleus | 32.24 | 30.8 |
| CDY31078 | Canola | endoplasmic reticulum | 32.24 | 30.8 |
Protein Annotations
| EnsemblPlants:CDY03005 | EnsemblPlantsGene:GSBRNA2T00115307001 | GO:A0A078EM01 | InterPro:GOLD_dom | InterPro:IPR009038 | InterPro:TMP21-related |
| PANTHER:PTHR22811 | PANTHER:PTHR22811:SF47 | PFAM:PF01105 | PFscan:PS50866 | ProteinID:CDY03005 | ProteinID:CDY03005.1 |
| SignalP:SignalP-noTM | SMART:SM01190 | TMHMM:TMhelix | UniParc:UPI0004EE130B | MapMan:22.3.5.2 | : |
Description
BnaC07g22220D
Coordinates
chrLK031939:-:244850..245827
Molecular Weight (calculated)
24459.4 Da
IEP (calculated)
6.366
GRAVY (calculated)
-0.183
Length
214 amino acids
Sequence
(BLAST)
(BLAST)
001: MDLLCWSSVC LLILTFLSPK TLSMRYEVHS GQMKCISEDI HAKSMTVGKY FIVNPNDEHH PLPDSHKIIV QVMSPQGTML HEADNTESGQ FSFTASETGS
101: YLACITAVDH KPETTLTIDF DWRSGVHSQD WSKVVKKSQV EMMESSVKSL LDTMVSIHEE MYYLHERGEE MHELNRSTNS KMAWLSFLSL GVCLSVAGFQ
201: FWHLKSFFEK KKLI
101: YLACITAVDH KPETTLTIDF DWRSGVHSQD WSKVVKKSQV EMMESSVKSL LDTMVSIHEE MYYLHERGEE MHELNRSTNS KMAWLSFLSL GVCLSVAGFQ
201: FWHLKSFFEK KKLI
001: MDLCRSSILL LIIALLSPRT LSMRYELKSS KTKCIGEEIH ENAMSIGKYF IVNPNEDNHP LPDSHKIIVK VMPPQGKNLH EADKVEAGQF SFTAYENGSY
101: VACITAIDYK PETTLTIDFD WKTGVHSKEW TNVAKKSQVD MMEYQVKTLM DTVISIHEEM YYLREREEEM QELNRSTNSK MAWLSFGSLV VCLSVAGLQF
201: WHLKTFFEKK KLI
101: VACITAIDYK PETTLTIDFD WKTGVHSKEW TNVAKKSQVD MMEYQVKTLM DTVISIHEEM YYLREREEEM QELNRSTNSK MAWLSFGSLV VCLSVAGLQF
201: WHLKTFFEKK KLI
Arabidopsis Description
Transmembrane emp24 domain-containing protein p24delta8 [Source:UniProtKB/Swiss-Prot;Acc:O81045]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.