Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, plastid, peroxisome
Predictor Summary:
Predictor Summary:
- plastid 2
- endoplasmic reticulum 2
- extracellular 1
- vacuole 1
- plasma membrane 1
- golgi 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH70789 | Soybean | cytosol, vacuole | 46.0 | 31.51 |
| GSMUA_Achr1P21760_001 | Banana | cytosol | 72.0 | 21.3 |
| CDY09334 | Canola | endoplasmic reticulum, extracellular, vacuole | 92.0 | 21.3 |
| CDY53680 | Canola | endoplasmic reticulum, extracellular, vacuole | 88.0 | 20.37 |
| GSMUA_AchrUn_... | Banana | cytosol | 68.0 | 20.12 |
| CDY33785 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 84.0 | 19.81 |
| CDY16125 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 84.0 | 19.81 |
| AT2G03290.1 | Thale cress | extracellular | 82.0 | 19.25 |
| CDY62212 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 82.0 | 19.25 |
| CDX96872 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 82.0 | 19.25 |
| CDY03005 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 82.0 | 19.16 |
| CDY00102 | Canola | cytosol | 64.0 | 18.93 |
| CDY08168 | Canola | endoplasmic reticulum | 62.0 | 18.79 |
| CDY45170 | Canola | endoplasmic reticulum, extracellular | 76.0 | 17.76 |
| PGSC0003DMT400007416 | Potato | endoplasmic reticulum, extracellular, vacuole | 74.0 | 17.29 |
| Solyc04g005570.2.1 | Tomato | endoplasmic reticulum, plasma membrane, vacuole | 74.0 | 17.21 |
| VIT_01s0182g00030.t01 | Wine grape | endoplasmic reticulum, extracellular, plasma membrane | 72.0 | 16.98 |
| Solyc05g013130.2.1 | Tomato | endoplasmic reticulum, extracellular, vacuole | 72.0 | 16.9 |
| PGSC0003DMT400073002 | Potato | extracellular | 72.0 | 16.9 |
| CDX85047 | Canola | endoplasmic reticulum | 72.0 | 16.82 |
| CDY24142 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 72.0 | 16.82 |
| CDY61620 | Canola | endoplasmic reticulum | 72.0 | 16.82 |
| Zm00001d022238_P001 | Maize | mitochondrion | 76.0 | 16.59 |
| EER92205 | Sorghum | endoplasmic reticulum, extracellular, plasma membrane | 70.0 | 16.36 |
| CDY16181 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 70.0 | 16.36 |
| KRH50555 | Soybean | endoplasmic reticulum | 72.0 | 16.29 |
| EER97600 | Sorghum | mitochondrion | 74.0 | 16.16 |
| Zm00001d006951_P001 | Maize | mitochondrion | 74.0 | 16.16 |
| CDX95934 | Canola | vacuole | 68.0 | 15.81 |
| KRG89554 | Soybean | endoplasmic reticulum | 68.0 | 15.45 |
| TraesCS2B01G180800.1 | Wheat | mitochondrion | 70.0 | 15.35 |
| CDY40925 | Canola | endoplasmic reticulum | 66.0 | 15.35 |
| Os07t0632700-01 | Rice | plasma membrane | 70.0 | 15.22 |
| TraesCS2A01G155600.1 | Wheat | golgi | 68.0 | 14.91 |
| TraesCS2D01G161400.1 | Wheat | endoplasmic reticulum, plastid | 68.0 | 14.91 |
| CDY44411 | Canola | golgi, plasma membrane, plastid | 66.0 | 14.86 |
| CDX85243 | Canola | mitochondrion | 66.0 | 14.86 |
| Solyc01g010940.2.1 | Tomato | nucleus, plastid | 64.0 | 14.81 |
| PGSC0003DMT400062438 | Potato | mitochondrion | 64.0 | 14.81 |
| CDY19998 | Canola | endoplasmic reticulum, extracellular | 64.0 | 14.81 |
| CDY04053 | Canola | endoplasmic reticulum | 66.0 | 14.8 |
| Os03t0376000-01 | Rice | endoplasmic reticulum, plasma membrane | 68.0 | 14.66 |
| HORVU2Hr1G028220.5 | Barley | endoplasmic reticulum, extracellular | 68.0 | 14.66 |
| CDY04681 | Canola | endoplasmic reticulum | 60.0 | 14.29 |
| CDY00971 | Canola | plasma membrane | 56.0 | 13.33 |
| CDY08577 | Canola | plasma membrane | 56.0 | 13.33 |
| CDY00701 | Canola | plasma membrane | 54.0 | 12.98 |
| CDX73906 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 54.0 | 12.98 |
| CDX73903 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 54.0 | 12.98 |
| CDX96570 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 58.0 | 12.45 |
| CDY38827 | Canola | endoplasmic reticulum, extracellular, vacuole | 58.0 | 12.18 |
| CDY36275 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 48.0 | 12.18 |
| CDX95293 | Canola | endoplasmic reticulum, extracellular, golgi | 52.0 | 12.04 |
| CDY23801 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 50.0 | 11.63 |
| CDY31789 | Canola | plasma membrane | 50.0 | 11.63 |
| CDY20688 | Canola | endoplasmic reticulum, golgi, nucleus | 52.0 | 11.61 |
| CDY31078 | Canola | endoplasmic reticulum | 52.0 | 11.61 |
| CDY39938 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 50.0 | 11.57 |
| CDY50894 | Canola | endoplasmic reticulum, golgi, plasma membrane | 50.0 | 11.16 |
| CDX93498 | Canola | endoplasmic reticulum, golgi, plasma membrane | 50.0 | 11.16 |
| Zm00001d047163_P001 | Maize | endoplasmic reticulum, extracellular, vacuole | 26.0 | 5.24 |
| AT2G03040.1 | Thale cress | extracellular | 4.0 | 1.2 |
| KRH70788 | Soybean | extracellular | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDY37184 | EnsemblPlantsGene:GSBRNA2T00063468001 | GO:A0A078HIK1 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:GOLD_dom | InterPro:IPR009038 | InterPro:TMP21-related | PANTHER:PTHR22811 | PANTHER:PTHR22811:SF47 | PFAM:PF01105 |
| ProteinID:CDY37184 | ProteinID:CDY37184.1 | SEG:seg | TMHMM:TMhelix | UniParc:UPI0004EDB63D | UniProt:A0A078HIK1 |
| MapMan:22.3.5.2 | : | : | : | : | : |
Description
BnaC02g34920DBnaC02g34920D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HIK1]
Coordinates
chrLK032394:+:85033..85185
Molecular Weight (calculated)
5824.3 Da
IEP (calculated)
10.621
GRAVY (calculated)
0.186
Length
50 amino acids
Sequence
(BLAST)
(BLAST)
1: MIREAEMQDL NRSTNSKMAW FSFLSLGVCL SVVGLQFWHL KSFFGKKKLI
001: MDLCRSSILL LIIALLSPRT LSMRYELKSS KTKCIGEEIH ENAMSIGKYF IVNPNEDNHP LPDSHKIIVK VMPPQGKNLH EADKVEAGQF SFTAYENGSY
101: VACITAIDYK PETTLTIDFD WKTGVHSKEW TNVAKKSQVD MMEYQVKTLM DTVISIHEEM YYLREREEEM QELNRSTNSK MAWLSFGSLV VCLSVAGLQF
201: WHLKTFFEKK KLI
101: VACITAIDYK PETTLTIDFD WKTGVHSKEW TNVAKKSQVD MMEYQVKTLM DTVISIHEEM YYLREREEEM QELNRSTNSK MAWLSFGSLV VCLSVAGLQF
201: WHLKTFFEKK KLI
Arabidopsis Description
Transmembrane emp24 domain-containing protein p24delta8 [Source:UniProtKB/Swiss-Prot;Acc:O81045]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.