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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, extracellular, vacuole

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 6
  • vacuole 6
  • plasma membrane 5
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, extracellular, vacuole
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:vacuole
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra026559.1-P Field mustard endoplasmic reticulum, extracellular, vacuole 99.07 99.07
CDY53680 Canola endoplasmic reticulum, extracellular, vacuole 94.91 94.91
CDY37184 Canola endoplasmic reticulum, peroxisome, plastid 21.3 92.0
CDY33785 Canola endoplasmic reticulum, extracellular, plasma membrane 71.3 72.64
CDY03005 Canola endoplasmic reticulum, extracellular, plasma membrane 71.76 72.43
CDX96872 Canola endoplasmic reticulum, extracellular, plasma membrane 70.83 71.83
CDY16125 Canola endoplasmic reticulum, extracellular, plasma membrane 70.37 71.7
CDY62212 Canola endoplasmic reticulum, extracellular, plasma membrane 70.37 71.36
CDY45170 Canola endoplasmic reticulum, extracellular 70.37 71.03
AT2G03290.1 Thale cress extracellular 69.44 70.42
AT2G03040.1 Thale cress extracellular 49.54 64.46
CDX85047 Canola endoplasmic reticulum 59.26 59.81
CDY16181 Canola endoplasmic reticulum, plasma membrane, vacuole 58.8 59.35
GSMUA_Achr1P21760_001 Banana cytosol 46.3 59.17
GSMUA_AchrUn_... Banana cytosol 45.83 58.58
CDY24142 Canola endoplasmic reticulum, plasma membrane, vacuole 57.41 57.94
CDY61620 Canola endoplasmic reticulum 56.94 57.48
PGSC0003DMT400007416 Potato endoplasmic reticulum, extracellular, vacuole 56.48 57.01
CDY40925 Canola endoplasmic reticulum 56.02 56.28
CDX95934 Canola vacuole 55.56 55.81
VIT_01s0182g00030.t01 Wine grape endoplasmic reticulum, extracellular, plasma membrane 54.63 55.66
KRH50555 Soybean endoplasmic reticulum 56.94 55.66
CDY00102 Canola cytosol 43.52 55.62
Solyc04g005570.2.1 Tomato endoplasmic reticulum, plasma membrane, vacuole 55.09 55.35
KRG89554 Soybean endoplasmic reticulum 54.63 53.64
EER92205 Sorghum endoplasmic reticulum, extracellular, plasma membrane 51.85 52.34
Solyc05g013130.2.1 Tomato endoplasmic reticulum, extracellular, vacuole 51.39 52.11
PGSC0003DMT400073002 Potato extracellular 51.39 52.11
CDY44411 Canola golgi, plasma membrane, plastid 53.24 51.8
CDY19998 Canola endoplasmic reticulum, extracellular 51.39 51.39
CDX85243 Canola mitochondrion 52.78 51.35
CDY04053 Canola endoplasmic reticulum 52.78 51.12
Solyc01g010940.2.1 Tomato nucleus, plastid 50.93 50.93
PGSC0003DMT400062438 Potato mitochondrion 50.93 50.93
Os07t0632700-01 Rice plasma membrane 52.78 49.57
TraesCS2B01G180800.1 Wheat mitochondrion 52.31 49.56
TraesCS2D01G161400.1 Wheat endoplasmic reticulum, plastid 51.85 49.12
TraesCS2A01G155600.1 Wheat golgi 51.39 48.68
HORVU2Hr1G028220.5 Barley endoplasmic reticulum, extracellular 51.39 47.84
Zm00001d022238_P001 Maize mitochondrion 50.46 47.6
EER97600 Sorghum mitochondrion 50.0 47.16
Os03t0376000-01 Rice endoplasmic reticulum, plasma membrane 50.46 46.98
Zm00001d006951_P001 Maize mitochondrion 49.54 46.72
KRH70789 Soybean cytosol, vacuole 14.81 43.84
KRH70788 Soybean extracellular 28.24 42.66
CDY04681 Canola endoplasmic reticulum 36.57 37.62
CDY08168 Canola endoplasmic reticulum 27.31 35.76
Zm00001d047163_P001 Maize endoplasmic reticulum, extracellular, vacuole 40.28 35.08
CDY00701 Canola plasma membrane 33.33 34.62
CDX73906 Canola endoplasmic reticulum, extracellular, plasma membrane 33.33 34.62
CDX73903 Canola endoplasmic reticulum, extracellular, plasma membrane 33.33 34.62
CDY31078 Canola endoplasmic reticulum 34.72 33.48
CDY20688 Canola endoplasmic reticulum, golgi, nucleus 34.72 33.48
CDX96570 Canola endoplasmic reticulum, extracellular, plasma membrane 35.65 33.05
CDY38827 Canola endoplasmic reticulum, extracellular, vacuole 35.65 32.35
CDY50894 Canola endoplasmic reticulum, golgi, plasma membrane 33.33 32.14
CDY31789 Canola plasma membrane 31.94 32.09
CDY23801 Canola endoplasmic reticulum, extracellular, plasma membrane 31.94 32.09
CDY39938 Canola endoplasmic reticulum, extracellular, plasma membrane 31.94 31.94
CDX95293 Canola endoplasmic reticulum, extracellular, golgi 31.94 31.94
CDX93498 Canola endoplasmic reticulum, golgi, plasma membrane 32.87 31.7
CDY08577 Canola plasma membrane 30.56 31.43
CDY00971 Canola plasma membrane 30.56 31.43
CDY36275 Canola endoplasmic reticulum, extracellular, plasma membrane 26.85 29.44
Protein Annotations
MapMan:22.3.5.2GO:A0A078F8H3UniProt:A0A078F8H3EnsemblPlants:CDY09334ProteinID:CDY09334ProteinID:CDY09334.1
GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005783GO:GO:0005789
GO:GO:0016020GO:GO:0016021InterPro:GOLD_domEnsemblPlantsGene:GSBRNA2T00030785001InterPro:IPR009038PFAM:PF01105
PFscan:PS50866PANTHER:PTHR22811PANTHER:PTHR22811:SF47SMART:SM01190SignalP:SignalP-noTMInterPro:TMP21-related
TMHMM:TMhelixUniParc:UPI0004EEF5ED::::
Description
BnaA02g26760DBnaA02g26760D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F8H3]
Coordinates
chrLK031995:-:19188..20349
Molecular Weight (calculated)
24676.8 Da
IEP (calculated)
6.948
GRAVY (calculated)
-0.141
Length
216 amino acids
Sequence
(BLAST)
001: MDLLRQSLGC LLIVALLSPT ALSMQFELRS GQMKCISEDI HEKSISVGKY FVVNPNEDHP LPDSHKITAK MVSPKWNTLH EAVKVEAGEF SFTAFETGDY
101: FTCISAVDHK PETTLTIDFV WMSGVHSAAS KDWSKVPKRS QVKMIELSVK RLFDTVESIH DEMYYLRDRE AEMQELNRST NSKMAWFSFL SLGVCLSVAG
201: LQFWHLKSFF EKKKLI
Best Arabidopsis Sequence Match ( AT2G03290.1 )
(BLAST)
001: MDLCRSSILL LIIALLSPRT LSMRYELKSS KTKCIGEEIH ENAMSIGKYF IVNPNEDNHP LPDSHKIIVK VMPPQGKNLH EADKVEAGQF SFTAYENGSY
101: VACITAIDYK PETTLTIDFD WKTGVHSKEW TNVAKKSQVD MMEYQVKTLM DTVISIHEEM YYLREREEEM QELNRSTNSK MAWLSFGSLV VCLSVAGLQF
201: WHLKTFFEKK KLI
Arabidopsis Description
Transmembrane emp24 domain-containing protein p24delta8 [Source:UniProtKB/Swiss-Prot;Acc:O81045]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.