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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, extracellular, plasma membrane

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 6
  • vacuole 5
  • plasma membrane 6
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, extracellular, plasma membrane
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra038147.1-P Field mustard endoplasmic reticulum, extracellular, plasma membrane 99.07 99.07
CDY31789 Canola plasma membrane 96.28 96.28
CDY39938 Canola endoplasmic reticulum, extracellular, plasma membrane 91.16 90.74
CDX95293 Canola endoplasmic reticulum, extracellular, golgi 89.77 89.35
AT1G57620.1 Thale cress endoplasmic reticulum, golgi, plasma membrane 79.07 80.19
KRH48283 Soybean cytosol 24.65 68.83
CDY31078 Canola endoplasmic reticulum 69.3 66.52
CDY50894 Canola endoplasmic reticulum, golgi, plasma membrane 68.84 66.07
CDY20688 Canola endoplasmic reticulum, golgi, nucleus 68.84 66.07
CDX93498 Canola endoplasmic reticulum, golgi, plasma membrane 67.91 65.18
VIT_12s0034g01440.t01 Wine grape endoplasmic reticulum, extracellular 65.12 64.81
KRH59179 Soybean endoplasmic reticulum 63.26 64.45
TraesCS7D01G170400.1 Wheat cytosol, endoplasmic reticulum, plasma membrane 57.67 63.92
TraesCS7A01G169500.1 Wheat cytosol, endoplasmic reticulum, plasma membrane 57.67 63.92
Solyc10g045640.1.1 Tomato endoplasmic reticulum, extracellular, plasma membrane 61.86 62.15
Zm00001d037163_P002 Maize extracellular, plasma membrane 60.93 62.09
Solyc01g104220.2.1 Tomato endoplasmic reticulum 60.93 61.79
Os06t0210100-01 Rice plastid 59.53 61.24
GSMUA_Achr6P02320_001 Banana endoplasmic reticulum, plasma membrane 60.93 60.65
EER88046 Sorghum endoplasmic reticulum 60.0 60.28
PGSC0003DMT400061146 Potato extracellular 58.6 60.0
KRH43057 Soybean extracellular 43.26 59.62
EES07590 Sorghum endoplasmic reticulum, extracellular, vacuole 56.74 58.94
GSMUA_AchrUn_... Banana endoplasmic reticulum, extracellular, plasma membrane 58.6 58.33
TraesCS6A01G330200.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 57.21 58.29
TraesCS6B01G361000.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 57.21 58.29
TraesCS6D01G309100.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 56.74 57.82
CDY04681 Canola endoplasmic reticulum 56.28 57.62
Os02t0768200-01 Rice endoplasmic reticulum, plasma membrane, vacuole 58.14 57.34
TraesCS7B01G074300.1 Wheat plasma membrane 57.21 56.94
KRH10436 Soybean endoplasmic reticulum 56.74 56.74
Zm00001d018194_P001 Maize extracellular 44.19 56.55
GSMUA_Achr10P... Banana endoplasmic reticulum, plasma membrane, vacuole 57.21 56.16
GSMUA_Achr3P20310_001 Banana plasma membrane 55.81 55.56
Zm00001d005857_P001 Maize cytosol, golgi 40.93 54.66
Os09t0453200-00 Rice endoplasmic reticulum, plasma membrane 53.02 53.77
TraesCS5B01G233900.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 51.63 53.11
TraesCS5A01G235500.1 Wheat extracellular, vacuole 51.16 52.38
TraesCS5D01G242600.1 Wheat endoplasmic reticulum 51.16 52.38
CDX96570 Canola endoplasmic reticulum, extracellular, plasma membrane 56.28 51.93
EER96837 Sorghum extracellular 50.23 51.92
CDY38827 Canola endoplasmic reticulum, extracellular, vacuole 56.28 50.84
KRH44035 Soybean endoplasmic reticulum, mitochondrion, plasma membrane 57.67 50.41
CDY37184 Canola endoplasmic reticulum, peroxisome, plastid 11.63 50.0
HORVU5Hr1G067730.1 Barley cytosol, peroxisome 51.63 49.33
CDY08168 Canola endoplasmic reticulum 36.28 47.27
CDX73906 Canola endoplasmic reticulum, extracellular, plasma membrane 45.12 46.63
CDX73903 Canola endoplasmic reticulum, extracellular, plasma membrane 45.12 46.63
CDY08577 Canola plasma membrane 45.12 46.19
CDY00971 Canola plasma membrane 45.12 46.19
Os08t0469400-00 Rice endoplasmic reticulum, extracellular, vacuole 29.3 45.99
CDY00701 Canola plasma membrane 43.72 45.19
HORVU7Hr1G035390.1 Barley mitochondrion, plastid 57.21 44.89
KXG25366 Sorghum plasma membrane 51.16 44.0
CDY36275 Canola endoplasmic reticulum, extracellular, plasma membrane 39.07 42.64
CDY00102 Canola cytosol 29.77 37.87
CDY16181 Canola endoplasmic reticulum, plasma membrane, vacuole 36.74 36.92
GSMUA_Achr6P10010_001 Banana nucleus, peroxisome, plasma membrane 54.42 36.79
CDX85047 Canola endoplasmic reticulum 36.28 36.45
CDX96872 Canola endoplasmic reticulum, extracellular, plasma membrane 34.88 35.21
CDY40925 Canola endoplasmic reticulum 34.42 34.42
CDY62212 Canola endoplasmic reticulum, extracellular, plasma membrane 33.95 34.27
CDY33785 Canola endoplasmic reticulum, extracellular, plasma membrane 33.49 33.96
CDY16125 Canola endoplasmic reticulum, extracellular, plasma membrane 33.49 33.96
CDX95934 Canola vacuole 33.95 33.95
CDY19998 Canola endoplasmic reticulum, extracellular 33.95 33.8
CDX85243 Canola mitochondrion 34.88 33.78
CDY45170 Canola endoplasmic reticulum, extracellular 33.49 33.64
CDY61620 Canola endoplasmic reticulum 33.49 33.64
CDY03005 Canola endoplasmic reticulum, extracellular, plasma membrane 33.02 33.18
CDY24142 Canola endoplasmic reticulum, plasma membrane, vacuole 32.56 32.71
CDY44411 Canola golgi, plasma membrane, plastid 33.49 32.43
CDY04053 Canola endoplasmic reticulum 33.49 32.29
CDY09334 Canola endoplasmic reticulum, extracellular, vacuole 32.09 31.94
CDY53680 Canola endoplasmic reticulum, extracellular, vacuole 30.7 30.56
Protein Annotations
MapMan:22.3.5.2GO:A0A078GEK5UniProt:A0A078GEK5EnsemblPlants:CDY23801ProteinID:CDY23801ProteinID:CDY23801.1
ncoils:CoilGO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005783
GO:GO:0005789GO:GO:0016020GO:GO:0016021InterPro:GOLD_domEnsemblPlantsGene:GSBRNA2T00024197001InterPro:IPR009038
PFAM:PF01105PFscan:PS50866PANTHER:PTHR22811PANTHER:PTHR22811:SF76SMART:SM01190SignalP:SignalP-noTM
InterPro:TMP21-relatedTMHMM:TMhelixUniParc:UPI0004EEE125SEG:seg::
Description
BnaA01g21520DBnaA01g21520D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GEK5]
Coordinates
chrLK032149:+:243978..245746
Molecular Weight (calculated)
24150.1 Da
IEP (calculated)
6.246
GRAVY (calculated)
0.030
Length
215 amino acids
Sequence
(BLAST)
001: MRREFATTLL LSTLFSFLVP ELIPVGEGVW LNIPKTGAKC VSEEIQSKVV VLADYLVISD EHSIFPTVSV KVTSPYGSVL HHSENATHGQ FAFTTQESGT
101: YLACFEAVGN SHGNKDISIN LDWKTGIAAK DWDSIARKEK IEGVELELRK LEAAVEAIHE NLLYLRNREA DMRIVSENTN SRVAWYSIMS LGICILVTGL
201: QILYLKQYFE RKKLI
Best Arabidopsis Sequence Match ( AT1G57620.1 )
(BLAST)
001: MKKKMIPTTI LLSALIFSLS PICEAVWLTV PHTGSKCVSE EIQSNVIVLA DYLVISEEHS IFPTVSVKVT APYGTVLHHR ENTTNGQFAF TTQESGTYLA
101: CFEADAKSHG NKDFSINIDW KTGIAAKDWD SIARKEKIEG VELEFKKLEG AVEAIHENLI YLRNREAEMR IVSEKTNSRV AWYSIMSLGI CIVVSGLQIL
201: YLKQYFEKKK LI
Arabidopsis Description
CYBTransmembrane emp24 domain-containing protein p24delta4 [Source:UniProtKB/Swiss-Prot;Acc:Q9FVU0]
SUBAcon: [endoplasmic reticulum,golgi,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.