Skip to main content
crop-pal logo
Canola
Search for another protein from :
Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum

Predictor Summary:
  • plastid 2
  • extracellular 5
  • endoplasmic reticulum 6
  • vacuole 4
  • plasma membrane 4
  • golgi 4
  • nucleus 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum
Any Predictor:nucleus, plastid, secretory
BaCelLo:plastid
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Plant-mPloc:nucleus, plastid
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:endoplasmic reticulum
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra016283.1-P Field mustard endoplasmic reticulum 100.0 100.0
CDY24142 Canola endoplasmic reticulum, plasma membrane, vacuole 94.86 94.86
CDY16181 Canola endoplasmic reticulum, plasma membrane, vacuole 80.84 80.84
CDX85047 Canola endoplasmic reticulum 79.91 79.91
AT1G26690.1 Thale cress endoplasmic reticulum, extracellular, vacuole 78.5 78.5
CDY37184 Canola endoplasmic reticulum, peroxisome, plastid 16.82 72.0
CDY40925 Canola endoplasmic reticulum 68.22 67.91
CDX95934 Canola vacuole 67.76 67.44
CDY33785 Canola endoplasmic reticulum, extracellular, plasma membrane 62.15 62.74
CDY16125 Canola endoplasmic reticulum, extracellular, plasma membrane 61.68 62.26
CDX96872 Canola endoplasmic reticulum, extracellular, plasma membrane 60.75 61.03
CDY62212 Canola endoplasmic reticulum, extracellular, plasma membrane 59.35 59.62
GSMUA_Achr1P21760_001 Banana cytosol 46.26 58.58
VIT_01s0182g00030.t01 Wine grape endoplasmic reticulum, extracellular, plasma membrane 57.48 58.02
GSMUA_AchrUn_... Banana cytosol 45.33 57.4
KRH50555 Soybean endoplasmic reticulum 58.88 57.01
CDY09334 Canola endoplasmic reticulum, extracellular, vacuole 57.48 56.94
Solyc05g013130.2.1 Tomato endoplasmic reticulum, extracellular, vacuole 56.07 56.34
PGSC0003DMT400073002 Potato extracellular 56.07 56.34
CDY03005 Canola endoplasmic reticulum, extracellular, plasma membrane 56.07 56.07
KRG89554 Soybean endoplasmic reticulum 57.48 55.91
PGSC0003DMT400007416 Potato endoplasmic reticulum, extracellular, vacuole 55.61 55.61
CDY45170 Canola endoplasmic reticulum, extracellular 55.61 55.61
CDY53680 Canola endoplasmic reticulum, extracellular, vacuole 55.14 54.63
Solyc04g005570.2.1 Tomato endoplasmic reticulum, plasma membrane, vacuole 54.67 54.42
EER92205 Sorghum endoplasmic reticulum, extracellular, plasma membrane 52.8 52.8
PGSC0003DMT400062438 Potato mitochondrion 53.27 52.78
Zm00001d022238_P001 Maize mitochondrion 56.07 52.4
EER97600 Sorghum mitochondrion 55.61 51.97
Solyc01g010940.2.1 Tomato nucleus, plastid 52.34 51.85
CDY00102 Canola cytosol 40.65 51.48
Zm00001d006951_P001 Maize mitochondrion 54.67 51.09
Os07t0632700-01 Rice plasma membrane 54.21 50.43
TraesCS2B01G180800.1 Wheat mitochondrion 52.34 49.12
TraesCS2A01G155600.1 Wheat golgi 51.4 48.25
TraesCS2D01G161400.1 Wheat endoplasmic reticulum, plastid 51.4 48.25
CDX85243 Canola mitochondrion 50.0 48.2
KRH70789 Soybean cytosol, vacuole 16.36 47.95
Os03t0376000-01 Rice endoplasmic reticulum, plasma membrane 51.87 47.84
CDY44411 Canola golgi, plasma membrane, plastid 49.07 47.3
CDY04053 Canola endoplasmic reticulum 49.07 47.09
KRH70788 Soybean extracellular 31.31 46.85
CDY19998 Canola endoplasmic reticulum, extracellular 47.2 46.76
HORVU2Hr1G028220.5 Barley endoplasmic reticulum, extracellular 50.47 46.55
CDY04681 Canola endoplasmic reticulum 34.58 35.24
Zm00001d047163_P001 Maize endoplasmic reticulum, extracellular, vacuole 40.65 35.08
CDX95293 Canola endoplasmic reticulum, extracellular, golgi 34.11 33.8
CDY31789 Canola plasma membrane 33.64 33.49
CDY23801 Canola endoplasmic reticulum, extracellular, plasma membrane 33.64 33.49
CDY31078 Canola endoplasmic reticulum 35.05 33.48
CDY39938 Canola endoplasmic reticulum, extracellular, plasma membrane 33.64 33.33
CDY20688 Canola endoplasmic reticulum, golgi, nucleus 34.58 33.04
CDX73903 Canola endoplasmic reticulum, extracellular, plasma membrane 31.78 32.69
CDX73906 Canola endoplasmic reticulum, extracellular, plasma membrane 31.78 32.69
CDY00701 Canola plasma membrane 31.78 32.69
CDY50894 Canola endoplasmic reticulum, golgi, plasma membrane 33.64 32.14
CDX96570 Canola endoplasmic reticulum, extracellular, plasma membrane 34.58 31.76
CDY08168 Canola endoplasmic reticulum 24.3 31.52
CDX93498 Canola endoplasmic reticulum, golgi, plasma membrane 32.71 31.25
CDY36275 Canola endoplasmic reticulum, extracellular, plasma membrane 28.5 30.96
CDY38827 Canola endoplasmic reticulum, extracellular, vacuole 34.11 30.67
CDY00971 Canola plasma membrane 29.91 30.48
CDY08577 Canola plasma membrane 29.91 30.48
Protein Annotations
MapMan:22.3.5.2GO:A0A078JBU3UniProt:A0A078JBU3EnsemblPlants:CDY61620ProteinID:CDY61620ProteinID:CDY61620.1
GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005783GO:GO:0005789
GO:GO:0016020GO:GO:0016021InterPro:GOLD_domEnsemblPlantsGene:GSBRNA2T00034111001InterPro:IPR009038PFAM:PF01105
PFscan:PS50866PANTHER:PTHR22811PANTHER:PTHR22811:SF47SMART:SM01190SignalP:SignalP-noTMInterPro:TMP21-related
TMHMM:TMhelixUniParc:UPI0002546026::::
Description
BnaA08g19840DBnaA08g19840D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JBU3]
Coordinates
chrLK034018:+:1513..2968
Molecular Weight (calculated)
24099.0 Da
IEP (calculated)
6.738
GRAVY (calculated)
-0.206
Length
214 amino acids
Sequence
(BLAST)
001: MVLRPEYLCT FLLTIAILSH VSQPLHFELK SGKSKCISED IKSNAMTVGK YTVVNPNEPH PTPQSHKINI RVTSSQGNTY HHAEEVDSGQ FSFTAVEGGE
101: YSACFAAHDH KPDVTLSIDL EWGSGVHYKS LGSLAKKSKV EVMEFEVKAL IETVNSIHDE MFYLRDREEE MQDLNRATNS KMAWLGLLSL FVCLGVAGMQ
201: FMHLKTFFEK KKVI
Best Arabidopsis Sequence Match ( AT1G26690.1 )
(BLAST)
001: MFLRSLNLCT ILLFLAISSQ VSQSLHFELQ SGRTKCISED IKSNSMTVGK YTVVNPNEAH PSPQSHKISI RVTSSYGNTY HHAEDVESGQ FAFTAVESGD
101: YMACYTAVDH KPEVTLSIDF DWRTGVQSKS WSSVAKKSQV EVMEFDVKRL IETVNSIHEE MFYLREREEE MQNLNRATNS KMAWLSFLSL FVCLGVAGMQ
201: FVHLKTFFEK KKVI
Arabidopsis Description
Transmembrane emp24 domain-containing protein p24delta9 [Source:UniProtKB/Swiss-Prot;Acc:Q9LQY3]
SUBAcon: [endoplasmic reticulum,extracellular,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.