Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 1
- endoplasmic reticulum 5
- extracellular 3
- vacuole 3
- plasma membrane 3
- golgi 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX95934 | Canola | vacuole | 96.28 | 96.28 |
| AT1G69460.1 | Thale cress | endoplasmic reticulum, extracellular, vacuole | 84.65 | 85.05 |
| CDY16181 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 74.88 | 75.23 |
| CDX85047 | Canola | endoplasmic reticulum | 73.49 | 73.83 |
| CDY61620 | Canola | endoplasmic reticulum | 67.91 | 68.22 |
| CDY24142 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 67.44 | 67.76 |
| CDY37184 | Canola | endoplasmic reticulum, peroxisome, plastid | 15.35 | 66.0 |
| CDY62212 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 64.19 | 64.79 |
| CDY33785 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 63.72 | 64.62 |
| CDX96872 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 63.72 | 64.32 |
| CDY16125 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 61.86 | 62.74 |
| GSMUA_AchrUn_... | Banana | cytosol | 48.84 | 62.13 |
| GSMUA_Achr1P21760_001 | Banana | cytosol | 48.84 | 62.13 |
| KRH50555 | Soybean | endoplasmic reticulum | 63.26 | 61.54 |
| Solyc05g013130.2.1 | Tomato | endoplasmic reticulum, extracellular, vacuole | 60.0 | 60.56 |
| VIT_01s0182g00030.t01 | Wine grape | endoplasmic reticulum, extracellular, plasma membrane | 59.53 | 60.38 |
| CDY03005 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 60.0 | 60.28 |
| KRG89554 | Soybean | endoplasmic reticulum | 61.4 | 60.0 |
| PGSC0003DMT400073002 | Potato | extracellular | 59.07 | 59.62 |
| CDY45170 | Canola | endoplasmic reticulum, extracellular | 58.6 | 58.88 |
| Solyc04g005570.2.1 | Tomato | endoplasmic reticulum, plasma membrane, vacuole | 57.21 | 57.21 |
| PGSC0003DMT400007416 | Potato | endoplasmic reticulum, extracellular, vacuole | 56.28 | 56.54 |
| CDY09334 | Canola | endoplasmic reticulum, extracellular, vacuole | 56.28 | 56.02 |
| CDY53680 | Canola | endoplasmic reticulum, extracellular, vacuole | 54.88 | 54.63 |
| EER92205 | Sorghum | endoplasmic reticulum, extracellular, plasma membrane | 52.56 | 52.8 |
| PGSC0003DMT400062438 | Potato | mitochondrion | 53.02 | 52.78 |
| CDY00102 | Canola | cytosol | 40.93 | 52.07 |
| Solyc01g010940.2.1 | Tomato | nucleus, plastid | 51.16 | 50.93 |
| Os07t0632700-01 | Rice | plasma membrane | 54.42 | 50.87 |
| TraesCS2D01G161400.1 | Wheat | endoplasmic reticulum, plastid | 53.49 | 50.44 |
| TraesCS2B01G180800.1 | Wheat | mitochondrion | 53.49 | 50.44 |
| KRH70788 | Soybean | extracellular | 33.49 | 50.35 |
| Zm00001d022238_P001 | Maize | mitochondrion | 53.49 | 50.22 |
| CDY19998 | Canola | endoplasmic reticulum, extracellular | 50.23 | 50.0 |
| TraesCS2A01G155600.1 | Wheat | golgi | 53.02 | 50.0 |
| EER97600 | Sorghum | mitochondrion | 53.02 | 49.78 |
| CDY44411 | Canola | golgi, plasma membrane, plastid | 50.7 | 49.1 |
| Zm00001d006951_P001 | Maize | mitochondrion | 52.09 | 48.91 |
| CDY04053 | Canola | endoplasmic reticulum | 50.7 | 48.88 |
| Os03t0376000-01 | Rice | endoplasmic reticulum, plasma membrane | 52.56 | 48.71 |
| HORVU2Hr1G028220.5 | Barley | endoplasmic reticulum, extracellular | 52.56 | 48.71 |
| CDX85243 | Canola | mitochondrion | 50.23 | 48.65 |
| KRH70789 | Soybean | cytosol, vacuole | 15.81 | 46.58 |
| Zm00001d047163_P001 | Maize | endoplasmic reticulum, extracellular, vacuole | 41.86 | 36.29 |
| CDY31078 | Canola | endoplasmic reticulum | 36.74 | 35.27 |
| CDY39938 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 35.35 | 35.19 |
| CDY31789 | Canola | plasma membrane | 34.88 | 34.88 |
| CDY20688 | Canola | endoplasmic reticulum, golgi, nucleus | 36.28 | 34.82 |
| CDY04681 | Canola | endoplasmic reticulum | 33.95 | 34.76 |
| CDX95293 | Canola | endoplasmic reticulum, extracellular, golgi | 34.88 | 34.72 |
| CDY23801 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 34.42 | 34.42 |
| CDY50894 | Canola | endoplasmic reticulum, golgi, plasma membrane | 35.81 | 34.38 |
| CDX93498 | Canola | endoplasmic reticulum, golgi, plasma membrane | 35.81 | 34.38 |
| CDX96570 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 35.35 | 32.62 |
| CDY38827 | Canola | endoplasmic reticulum, extracellular, vacuole | 34.88 | 31.51 |
| CDX73906 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 29.77 | 30.77 |
| CDX73903 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 29.77 | 30.77 |
| CDY00701 | Canola | plasma membrane | 29.3 | 30.29 |
| CDY08577 | Canola | plasma membrane | 27.91 | 28.57 |
| CDY00971 | Canola | plasma membrane | 27.91 | 28.57 |
| CDY08168 | Canola | endoplasmic reticulum | 21.86 | 28.48 |
| CDY36275 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 25.58 | 27.92 |
Protein Annotations
| MapMan:22.3.5.2 | GO:A0A078HQP0 | UniProt:A0A078HQP0 | EnsemblPlants:CDY40925 | ProteinID:CDY40925 | ProteinID:CDY40925.1 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005783 | GO:GO:0005789 |
| GO:GO:0016020 | GO:GO:0016021 | InterPro:GOLD_dom | EnsemblPlantsGene:GSBRNA2T00071977001 | InterPro:IPR009038 | PFAM:PF01105 |
| PFscan:PS50866 | PANTHER:PTHR22811 | PANTHER:PTHR22811:SF47 | SMART:SM01190 | SignalP:SignalP-noTM | InterPro:TMP21-related |
| TMHMM:TMhelix | UniParc:UPI0004EAF455 | : | : | : | : |
Description
BnaC06g30630DBnaC06g30630D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HQP0]
Coordinates
chrLK032484:-:162191..163509
Molecular Weight (calculated)
24292.0 Da
IEP (calculated)
7.382
GRAVY (calculated)
-0.181
Length
215 amino acids
Sequence
(BLAST)
(BLAST)
001: MFLLRSQKLW TVLVILAIGS RVTHSLHFDL HSGRTKCIAE DIKSNSMTVG KYSVDNPHDG HDLPQSHKIS VKVTSSSGNA YHHADQVASG QFAFSAVEAG
101: DYMACFSAVD HKPEVTLSID FEWRTGVQSK SWATVAKKSQ VETMEFDVKS LLDTVNSIHE EMFYLREREE QMQDLNRSTN TKMAWLSLLS LFVCIGVAAM
201: QYVHLKTFFE KKKVI
101: DYMACFSAVD HKPEVTLSID FEWRTGVQSK SWATVAKKSQ VETMEFDVKS LLDTVNSIHE EMFYLREREE QMQDLNRSTN TKMAWLSLLS LFVCIGVAAM
201: QYVHLKTFFE KKKVI
001: MFLQSQKLWT MLLILAIWSP ISHSLHFDLH SGRTKCIAED IKSNSMTVGK YNIDNPHEGQ ALPQTHKISV KVTSNSGNNY HHAEQVDSGQ FAFSAVEAGD
101: YMACFTAVDH KPEVSLSIDF EWKTGVQSKS WANVAKKSQV EVMEFEVKSL LDTVNSIHEE MYYLRDREEE MQDLNRSTNT KMAWLSVLSF FVCIGVAGMQ
201: FLHLKTFFEK KKVI
101: YMACFTAVDH KPEVSLSIDF EWKTGVQSKS WANVAKKSQV EVMEFEVKSL LDTVNSIHEE MYYLRDREEE MQDLNRSTNT KMAWLSVLSF FVCIGVAGMQ
201: FLHLKTFFEK KKVI
Arabidopsis Description
Transmembrane emp24 domain-containing protein p24delta10 [Source:UniProtKB/Swiss-Prot;Acc:Q8VY92]
SUBAcon: [endoplasmic reticulum,extracellular,vacuole]
SUBAcon: [endoplasmic reticulum,extracellular,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.