CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 1
cytosol 2
mitochondrion 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	golgi
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY19998	Canola	endoplasmic reticulum, extracellular	96.45	75.46
CDX85243	Canola	mitochondrion	89.94	68.47
CDY44411	Canola	golgi, plasma membrane, plastid	86.98	66.22
CDY04053	Canola	endoplasmic reticulum	86.98	65.92
AT3G29070.1	Thale cress	mitochondrion	86.39	64.89
CDY37184	Canola	endoplasmic reticulum, peroxisome, plastid	18.93	64.0
GSMUA_AchrUn_...	Banana	cytosol	61.54	61.54
GSMUA_Achr1P21760_001	Banana	cytosol	60.35	60.35
KRH13540	Soybean	cytosol	23.67	51.28
EER92205	Sorghum	endoplasmic reticulum, extracellular, plasma membrane	60.95	48.13
VIT_14s0108g01140.t01	Wine grape	extracellular	58.58	47.14
KRG93569	Soybean	endoplasmic reticulum, extracellular, plasma membrane	58.58	45.83
CDX96872	Canola	endoplasmic reticulum, extracellular, plasma membrane	57.4	45.54
KRH18453	Soybean	golgi, plasma membrane, vacuole	57.99	45.37
CDY62212	Canola	endoplasmic reticulum, extracellular, plasma membrane	56.8	45.07
CDY16125	Canola	endoplasmic reticulum, extracellular, plasma membrane	56.21	44.81
CDY33785	Canola	endoplasmic reticulum, extracellular, plasma membrane	56.21	44.81
CDY53680	Canola	endoplasmic reticulum, extracellular, vacuole	56.8	44.44
CDY09334	Canola	endoplasmic reticulum, extracellular, vacuole	55.62	43.52
TraesCS2B01G180800.1	Wheat	mitochondrion	58.58	43.42
Os03t0376000-01	Rice	endoplasmic reticulum, plasma membrane	59.17	43.1
HORVU2Hr1G028220.5	Barley	endoplasmic reticulum, extracellular	59.17	43.1
CDY16181	Canola	endoplasmic reticulum, plasma membrane, vacuole	54.44	42.99
CDY03005	Canola	endoplasmic reticulum, extracellular, plasma membrane	54.44	42.99
TraesCS2A01G155600.1	Wheat	golgi	57.99	42.98
TraesCS2D01G161400.1	Wheat	endoplasmic reticulum, plastid	57.99	42.98
Zm00001d022238_P001	Maize	mitochondrion	57.99	42.79
EER97600	Sorghum	mitochondrion	57.99	42.79
Os07t0632700-01	Rice	plasma membrane	57.99	42.61
CDX85047	Canola	endoplasmic reticulum	53.85	42.52
Zm00001d006951_P001	Maize	mitochondrion	56.8	41.92
CDX95934	Canola	vacuole	53.25	41.86
KRH01218	Soybean	endoplasmic reticulum, plasma membrane, vacuole	53.85	41.74
CDY45170	Canola	endoplasmic reticulum, extracellular	52.66	41.59
CDY40925	Canola	endoplasmic reticulum	52.07	40.93
CDY24142	Canola	endoplasmic reticulum, plasma membrane, vacuole	51.48	40.65
CDY61620	Canola	endoplasmic reticulum	51.48	40.65
Zm00001d047163_P001	Maize	endoplasmic reticulum, extracellular, vacuole	46.75	31.85
CDY31789	Canola	plasma membrane	37.87	29.77
CDY23801	Canola	endoplasmic reticulum, extracellular, plasma membrane	37.87	29.77
CDY31078	Canola	endoplasmic reticulum	39.05	29.46
CDY20688	Canola	endoplasmic reticulum, golgi, nucleus	39.05	29.46
CDX95293	Canola	endoplasmic reticulum, extracellular, golgi	37.28	29.17
CDY50894	Canola	endoplasmic reticulum, golgi, plasma membrane	38.46	29.02
CDY39938	Canola	endoplasmic reticulum, extracellular, plasma membrane	36.69	28.7
CDX93498	Canola	endoplasmic reticulum, golgi, plasma membrane	37.87	28.57
CDY04681	Canola	endoplasmic reticulum	34.91	28.1
CDX73903	Canola	endoplasmic reticulum, extracellular, plasma membrane	33.14	26.92
CDX73906	Canola	endoplasmic reticulum, extracellular, plasma membrane	33.14	26.92
CDY00701	Canola	plasma membrane	33.14	26.92
CDY00971	Canola	plasma membrane	32.54	26.19
CDY08577	Canola	plasma membrane	32.54	26.19
CDY36275	Canola	endoplasmic reticulum, extracellular, plasma membrane	30.18	25.89
CDX96570	Canola	endoplasmic reticulum, extracellular, plasma membrane	34.91	25.32
CDY38827	Canola	endoplasmic reticulum, extracellular, vacuole	34.32	24.37
CDY08168	Canola	endoplasmic reticulum	21.3	21.82

Protein Annotations

EnsemblPlants:CDY00102	EnsemblPlantsGene:GSBRNA2T00109601001	GO:A0A078EG93	InterPro:GOLD_dom	InterPro:IPR009038	InterPro:TMP21-related
PANTHER:PTHR22811	PANTHER:PTHR22811:SF47	PFAM:PF01105	PFscan:PS50866	ProteinID:CDY00102	ProteinID:CDY00102.1
SEG:seg	SMART:SM01190	TMHMM:TMhelix	UniParc:UPI0004EAD538	MapMan:22.3.5.2	:

Description

BnaC09g01990D

Coordinates

chrLK031916:-:786993..788306

Molecular Weight (calculated)

19274.1 Da

IEP (calculated)

7.236

GRAVY (calculated)

-0.292

Length

169 amino acids

Sequence
(BLAST)

001: MTVGNYSIVN PNEALHLPAS HKIYVTVTSP KGHSQHHAEN VESGKFVFTA MESGDYTTCF VSPGFRPPAK FAVDFEWKSG VEAKDWTTIA KRGQINMLEV
101: EVRKLLDVTE SIHDEMFELR EREREMQELN RSTNSRMAAL SLLSFVFTLS VAGLQLWHLK SFLERKKLL

Best Arabidopsis Sequence Match ( AT3G29070.1 )
(BLAST)

001: MDLLPSRYKI HKTKLRWILT MMTMMMMMVM RRGESMRLDM ESGNTKCISD DIKTNYMTVG TYSIVNPNEG HHLPPSHKLF VTVSSPKGKS HHHAENVESG
101: KFVFTAEETG DYMTCFVAPG YRPTAKFAVD FEWKSGVEAK DWTTIAKRGQ ITMLEVEVRK LLDVTETIHE EMFQLIERER EMQELNRSTN SRMAALSLLS
201: FVVTMSVAGL QLRHLKSFLE RKKLL

Arabidopsis Description

Transmembrane emp24 domain-containing protein p24delta11 [Source:UniProtKB/Swiss-Prot;Acc:Q9LJV9]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.