Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 6
- vacuole 5
- plasma membrane 5
- golgi 5
- plastid 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra024781.1-P | Field mustard | endoplasmic reticulum, extracellular | 100.0 | 100.0 |
| CDY03005 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 97.2 | 97.2 |
| CDY37184 | Canola | endoplasmic reticulum, peroxisome, plastid | 17.76 | 76.0 |
| CDY33785 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 72.43 | 73.11 |
| AT2G03290.1 | Thale cress | extracellular | 72.43 | 72.77 |
| CDX96872 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 71.96 | 72.3 |
| CDY62212 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 71.5 | 71.83 |
| CDY16125 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 70.56 | 71.23 |
| AT2G03040.1 | Thale cress | extracellular | 54.67 | 70.48 |
| CDY09334 | Canola | endoplasmic reticulum, extracellular, vacuole | 71.03 | 70.37 |
| CDY53680 | Canola | endoplasmic reticulum, extracellular, vacuole | 71.03 | 70.37 |
| GSMUA_Achr1P21760_001 | Banana | cytosol | 47.66 | 60.35 |
| GSMUA_AchrUn_... | Banana | cytosol | 46.73 | 59.17 |
| CDY40925 | Canola | endoplasmic reticulum | 58.88 | 58.6 |
| CDX95934 | Canola | vacuole | 57.94 | 57.67 |
| CDY16181 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 57.01 | 57.01 |
| VIT_01s0182g00030.t01 | Wine grape | endoplasmic reticulum, extracellular, plasma membrane | 56.07 | 56.6 |
| CDX85047 | Canola | endoplasmic reticulum | 56.54 | 56.54 |
| CDY61620 | Canola | endoplasmic reticulum | 55.61 | 55.61 |
| KRH50555 | Soybean | endoplasmic reticulum | 57.01 | 55.2 |
| PGSC0003DMT400007416 | Potato | endoplasmic reticulum, extracellular, vacuole | 54.67 | 54.67 |
| CDY24142 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 54.67 | 54.67 |
| KRG89554 | Soybean | endoplasmic reticulum | 55.61 | 54.09 |
| Solyc04g005570.2.1 | Tomato | endoplasmic reticulum, plasma membrane, vacuole | 54.21 | 53.95 |
| EER92205 | Sorghum | endoplasmic reticulum, extracellular, plasma membrane | 53.74 | 53.74 |
| CDY00102 | Canola | cytosol | 41.59 | 52.66 |
| PGSC0003DMT400062438 | Potato | mitochondrion | 52.34 | 51.85 |
| Solyc05g013130.2.1 | Tomato | endoplasmic reticulum, extracellular, vacuole | 50.93 | 51.17 |
| Solyc01g010940.2.1 | Tomato | nucleus, plastid | 51.4 | 50.93 |
| PGSC0003DMT400073002 | Potato | extracellular | 50.47 | 50.7 |
| Os07t0632700-01 | Rice | plasma membrane | 53.74 | 50.0 |
| TraesCS2D01G161400.1 | Wheat | endoplasmic reticulum, plastid | 52.34 | 49.12 |
| TraesCS2B01G180800.1 | Wheat | mitochondrion | 52.34 | 49.12 |
| EER97600 | Sorghum | mitochondrion | 51.87 | 48.47 |
| HORVU2Hr1G028220.5 | Barley | endoplasmic reticulum, extracellular | 52.34 | 48.28 |
| TraesCS2A01G155600.1 | Wheat | golgi | 51.4 | 48.25 |
| CDY19998 | Canola | endoplasmic reticulum, extracellular | 48.6 | 48.15 |
| Zm00001d022238_P001 | Maize | mitochondrion | 51.4 | 48.03 |
| Os03t0376000-01 | Rice | endoplasmic reticulum, plasma membrane | 51.87 | 47.84 |
| CDX85243 | Canola | mitochondrion | 49.53 | 47.75 |
| CDY44411 | Canola | golgi, plasma membrane, plastid | 49.07 | 47.3 |
| Zm00001d006951_P001 | Maize | mitochondrion | 50.47 | 47.16 |
| CDY04053 | Canola | endoplasmic reticulum | 48.6 | 46.64 |
| KRH70789 | Soybean | cytosol, vacuole | 15.42 | 45.21 |
| KRH70788 | Soybean | extracellular | 28.97 | 43.36 |
| Zm00001d047163_P001 | Maize | endoplasmic reticulum, extracellular, vacuole | 41.59 | 35.89 |
| CDY00971 | Canola | plasma membrane | 35.05 | 35.71 |
| CDY08577 | Canola | plasma membrane | 35.05 | 35.71 |
| CDY04681 | Canola | endoplasmic reticulum | 34.58 | 35.24 |
| CDX73903 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 34.11 | 35.1 |
| CDX73906 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 34.11 | 35.1 |
| CDY00701 | Canola | plasma membrane | 34.11 | 35.1 |
| CDY39938 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 34.58 | 34.26 |
| CDX95293 | Canola | endoplasmic reticulum, extracellular, golgi | 34.58 | 34.26 |
| CDY23801 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 33.64 | 33.49 |
| CDY31789 | Canola | plasma membrane | 33.64 | 33.49 |
| CDX96570 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 35.05 | 32.19 |
| CDX93498 | Canola | endoplasmic reticulum, golgi, plasma membrane | 33.64 | 32.14 |
| CDY36275 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 29.44 | 31.98 |
| CDY50894 | Canola | endoplasmic reticulum, golgi, plasma membrane | 33.18 | 31.7 |
| CDY38827 | Canola | endoplasmic reticulum, extracellular, vacuole | 35.05 | 31.51 |
| CDY20688 | Canola | endoplasmic reticulum, golgi, nucleus | 32.24 | 30.8 |
| CDY31078 | Canola | endoplasmic reticulum | 32.24 | 30.8 |
| CDY08168 | Canola | endoplasmic reticulum | 23.36 | 30.3 |
Protein Annotations
| MapMan:22.3.5.2 | GO:A0A078I2S4 | UniProt:A0A078I2S4 | EnsemblPlants:CDY45170 | ProteinID:CDY45170 | ProteinID:CDY45170.1 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005783 | GO:GO:0005789 |
| GO:GO:0016020 | GO:GO:0016021 | InterPro:GOLD_dom | EnsemblPlantsGene:GSBRNA2T00081591001 | InterPro:IPR009038 | PFAM:PF01105 |
| PFscan:PS50866 | PANTHER:PTHR22811 | PANTHER:PTHR22811:SF47 | SMART:SM01190 | SignalP:SignalP-noTM | InterPro:TMP21-related |
| TMHMM:TMhelix | UniParc:UPI000253F85D | : | : | : | : |
Description
BnaA06g33740DBnaA06g33740D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I2S4]
Coordinates
chrLK032617:-:31111..32614
Molecular Weight (calculated)
24348.4 Da
IEP (calculated)
6.366
GRAVY (calculated)
-0.143
Length
214 amino acids
Sequence
(BLAST)
(BLAST)
001: MDLLCWSSVC LLILTFLSPK TLSMRYEVHS GQMKCISEDI HAKSMSVGKY FIVNPNDEHH PLPDSHKIIV QVMSPQGTML HEADNTESGQ FSFTASETGS
101: YLACITAVDH KPETTLTIDL DWRSGVHSQD WSKVVKKSQV EMMESSVKSL LDTIVSIHEE MYYLHERGEE MHELNRSTNS KMALLSFLSL GICLSVAGFQ
201: FWHLKTFFEK KKLI
101: YLACITAVDH KPETTLTIDL DWRSGVHSQD WSKVVKKSQV EMMESSVKSL LDTIVSIHEE MYYLHERGEE MHELNRSTNS KMALLSFLSL GICLSVAGFQ
201: FWHLKTFFEK KKLI
001: MDLCRSSILL LIIALLSPRT LSMRYELKSS KTKCIGEEIH ENAMSIGKYF IVNPNEDNHP LPDSHKIIVK VMPPQGKNLH EADKVEAGQF SFTAYENGSY
101: VACITAIDYK PETTLTIDFD WKTGVHSKEW TNVAKKSQVD MMEYQVKTLM DTVISIHEEM YYLREREEEM QELNRSTNSK MAWLSFGSLV VCLSVAGLQF
201: WHLKTFFEKK KLI
101: VACITAIDYK PETTLTIDFD WKTGVHSKEW TNVAKKSQVD MMEYQVKTLM DTVISIHEEM YYLREREEEM QELNRSTNSK MAWLSFGSLV VCLSVAGLQF
201: WHLKTFFEKK KLI
Arabidopsis Description
Transmembrane emp24 domain-containing protein p24delta8 [Source:UniProtKB/Swiss-Prot;Acc:O81045]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.