CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, golgi, plastid

Predictor Summary:

nucleus 1
mitochondrion 2
golgi 1
plastid 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra033081.1-P	Field mustard	golgi, plasma membrane, plastid	99.55	99.55
CDY04053	Canola	endoplasmic reticulum	99.1	98.65
CDY00102	Canola	cytosol	66.22	86.98
CDX85243	Canola	mitochondrion	85.14	85.14
CDY19998	Canola	endoplasmic reticulum, extracellular	81.98	84.26
AT3G29070.1	Thale cress	mitochondrion	77.93	76.89
CDY37184	Canola	endoplasmic reticulum, peroxisome, plastid	14.86	66.0
GSMUA_AchrUn_...	Banana	cytosol	45.95	60.35
GSMUA_Achr1P21760_001	Banana	cytosol	45.95	60.35
VIT_14s0108g01140.t01	Wine grape	extracellular	54.95	58.1
CDX96872	Canola	endoplasmic reticulum, extracellular, plasma membrane	52.7	54.93
CDY33785	Canola	endoplasmic reticulum, extracellular, plasma membrane	51.8	54.25
EER92205	Sorghum	endoplasmic reticulum, extracellular, plasma membrane	52.25	54.21
CDY62212	Canola	endoplasmic reticulum, extracellular, plasma membrane	51.8	53.99
CDY16125	Canola	endoplasmic reticulum, extracellular, plasma membrane	51.35	53.77
CDY09334	Canola	endoplasmic reticulum, extracellular, vacuole	51.8	53.24
CDY16181	Canola	endoplasmic reticulum, plasma membrane, vacuole	50.9	52.8
KRH18453	Soybean	golgi, plasma membrane, vacuole	51.35	52.78
CDX85047	Canola	endoplasmic reticulum	50.45	52.34
KRG93569	Soybean	endoplasmic reticulum, extracellular, plasma membrane	50.9	52.31
CDX95934	Canola	vacuole	50.0	51.63
CDY53680	Canola	endoplasmic reticulum, extracellular, vacuole	50.0	51.39
TraesCS2B01G180800.1	Wheat	mitochondrion	52.7	51.32
KRH13540	Soybean	cytosol	18.02	51.28
CDY03005	Canola	endoplasmic reticulum, extracellular, plasma membrane	49.1	50.93
TraesCS2D01G161400.1	Wheat	endoplasmic reticulum, plastid	52.25	50.88
CDY40925	Canola	endoplasmic reticulum	49.1	50.7
TraesCS2A01G155600.1	Wheat	golgi	51.8	50.44
Os07t0632700-01	Rice	plasma membrane	52.25	50.43
Zm00001d022238_P001	Maize	mitochondrion	51.35	49.78
HORVU2Hr1G028220.5	Barley	endoplasmic reticulum, extracellular	51.8	49.57
Os03t0376000-01	Rice	endoplasmic reticulum, plasma membrane	51.8	49.57
EER97600	Sorghum	mitochondrion	50.9	49.34
KRH01218	Soybean	endoplasmic reticulum, plasma membrane, vacuole	48.2	49.08
CDY24142	Canola	endoplasmic reticulum, plasma membrane, vacuole	47.3	49.07
CDY45170	Canola	endoplasmic reticulum, extracellular	47.3	49.07
CDY61620	Canola	endoplasmic reticulum	47.3	49.07
Zm00001d006951_P001	Maize	mitochondrion	50.0	48.47
Zm00001d047163_P001	Maize	endoplasmic reticulum, extracellular, vacuole	42.79	38.31
CDY04681	Canola	endoplasmic reticulum	32.43	34.29
CDY31789	Canola	plasma membrane	32.88	33.95
CDY23801	Canola	endoplasmic reticulum, extracellular, plasma membrane	32.43	33.49
CDY20688	Canola	endoplasmic reticulum, golgi, nucleus	33.78	33.48
CDY31078	Canola	endoplasmic reticulum	33.78	33.48
CDX93498	Canola	endoplasmic reticulum, golgi, plasma membrane	32.88	32.59
CDX95293	Canola	endoplasmic reticulum, extracellular, golgi	31.53	32.41
CDY50894	Canola	endoplasmic reticulum, golgi, plasma membrane	32.43	32.14
CDY39938	Canola	endoplasmic reticulum, extracellular, plasma membrane	31.08	31.94
CDX96570	Canola	endoplasmic reticulum, extracellular, plasma membrane	31.98	30.47
CDY08168	Canola	endoplasmic reticulum	22.52	30.3
CDX73906	Canola	endoplasmic reticulum, extracellular, plasma membrane	28.38	30.29
CDX73903	Canola	endoplasmic reticulum, extracellular, plasma membrane	28.38	30.29
CDY00701	Canola	plasma membrane	28.38	30.29
CDY08577	Canola	plasma membrane	27.93	29.52
CDY00971	Canola	plasma membrane	27.93	29.52
CDY38827	Canola	endoplasmic reticulum, extracellular, vacuole	31.08	28.99
CDY36275	Canola	endoplasmic reticulum, extracellular, plasma membrane	24.77	27.92

Protein Annotations

MapMan:22.3.5.2	GO:A0A078I3H3	UniProt:A0A078I3H3	EnsemblPlants:CDY44411	ProteinID:CDY44411	ProteinID:CDY44411.1
ncoils:Coil	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005783
GO:GO:0005789	GO:GO:0016020	GO:GO:0016021	InterPro:GOLD_dom	EnsemblPlantsGene:GSBRNA2T00080091001	InterPro:IPR009038
PFAM:PF01105	PFscan:PS50866	PANTHER:PTHR22811	PANTHER:PTHR22811:SF47	SMART:SM01190	InterPro:TMP21-related
TMHMM:TMhelix	UniParc:UPI0004EE653E	SEG:seg	:	:	:

Description

BnaA02g29660DBnaA02g29660D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I3H3]

Coordinates

chrLK032588:-:149092..151772

Molecular Weight (calculated)

25235.9 Da

IEP (calculated)

7.602

GRAVY (calculated)

-0.060

Length

222 amino acids

Sequence
(BLAST)

001: MDLRLSTCKI QMTTSRLIII TMTMLMMRTG DSMRLDLESG MTKCISDDIK MNYLTVGTYS VVNPNEAIHL PASHKIFVTV ASPKGHTQHQ AENVESGKFV
101: FTAVEDGDYT TCFIAPVLKP PAKFAVDFEW KSGVEAKDWA TIAKRGQINM LEVEVRKLLD VTESIHDEMF LLREREREMQ ELNRSTNSRM AGLSLFSLVV
201: TLFVAGLQLW HLKSFLERKK LL

Best Arabidopsis Sequence Match ( AT3G29070.1 )
(BLAST)

001: MDLLPSRYKI HKTKLRWILT MMTMMMMMVM RRGESMRLDM ESGNTKCISD DIKTNYMTVG TYSIVNPNEG HHLPPSHKLF VTVSSPKGKS HHHAENVESG
101: KFVFTAEETG DYMTCFVAPG YRPTAKFAVD FEWKSGVEAK DWTTIAKRGQ ITMLEVEVRK LLDVTETIHE EMFQLIERER EMQELNRSTN SRMAALSLLS
201: FVVTMSVAGL QLRHLKSFLE RKKLL

Arabidopsis Description

Transmembrane emp24 domain-containing protein p24delta11 [Source:UniProtKB/Swiss-Prot;Acc:Q9LJV9]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.