Factsheet for TraesCS2B01G180800.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
endoplasmic reticulum 2
mitochondrion 4
extracellular 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, secretory
iPSORT:	plastid
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G161400.1	Wheat	endoplasmic reticulum, plastid	98.25	98.25
TraesCS2A01G155600.1	Wheat	golgi	97.81	97.81
HORVU2Hr1G028220.5	Barley	endoplasmic reticulum, extracellular	92.54	90.95
Zm00001d022238_P001	Maize	mitochondrion	84.65	84.28
EER97600	Sorghum	mitochondrion	84.21	83.84
Zm00001d006951_P001	Maize	mitochondrion	83.77	83.41
Os07t0632700-01	Rice	plasma membrane	83.77	83.04
GSMUA_Achr1P21760_001	Banana	cytosol	55.26	74.56
GSMUA_AchrUn_...	Banana	cytosol	54.82	73.96
CDY37184	Canola	endoplasmic reticulum, peroxisome, plastid	15.35	70.0
VIT_01s0182g00030.t01	Wine grape	endoplasmic reticulum, extracellular, plasma membrane	61.4	66.04
VIT_14s0108g01140.t01	Wine grape	extracellular	59.21	64.29
KRH50555	Soybean	endoplasmic reticulum	61.84	63.8
KRH13540	Soybean	cytosol	21.49	62.82
KRG89554	Soybean	endoplasmic reticulum	59.65	61.82
KRH18453	Soybean	golgi, plasma membrane, vacuole	55.7	58.8
KRG93569	Soybean	endoplasmic reticulum, extracellular, plasma membrane	55.7	58.8
Solyc04g005570.2.1	Tomato	endoplasmic reticulum, plasma membrane, vacuole	55.26	58.6
CDY00102	Canola	cytosol	43.42	58.58
PGSC0003DMT400007416	Potato	endoplasmic reticulum, extracellular, vacuole	54.82	58.41
AT1G26690.1	Thale cress	endoplasmic reticulum, extracellular, vacuole	54.39	57.94
PGSC0003DMT400073002	Potato	extracellular	53.95	57.75
Bra026866.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	53.51	57.55
CDY33785	Canola	endoplasmic reticulum, extracellular, plasma membrane	53.51	57.55
CDY16125	Canola	endoplasmic reticulum, extracellular, plasma membrane	53.07	57.08
Solyc05g013130.2.1	Tomato	endoplasmic reticulum, extracellular, vacuole	52.63	56.34
KRH70789	Soybean	cytosol, vacuole	17.98	56.16
CDX85047	Canola	endoplasmic reticulum	52.63	56.07
AT1G14010.1	Thale cress	endoplasmic reticulum, extracellular, plasma membrane	51.75	55.66
CDY16181	Canola	endoplasmic reticulum, plasma membrane, vacuole	52.19	55.61
Bra024694.1-P	Field mustard	endoplasmic reticulum, plasma membrane	51.75	55.14
PGSC0003DMT400062438	Potato	mitochondrion	52.19	55.09
CDX96872	Canola	endoplasmic reticulum, extracellular, plasma membrane	51.32	54.93
Solyc01g010940.2.1	Tomato	nucleus, plastid	51.75	54.63
CDY62212	Canola	endoplasmic reticulum, extracellular, plasma membrane	50.88	54.46
Bra004382.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	50.88	53.95
CDX95934	Canola	vacuole	50.88	53.95
Bra036221.1-P	Field mustard	endoplasmic reticulum, extracellular	50.88	53.7
CDY19998	Canola	endoplasmic reticulum, extracellular	50.88	53.7
AT2G03290.1	Thale cress	extracellular	50.0	53.52
CDY40925	Canola	endoplasmic reticulum	50.44	53.49
CDY04053	Canola	endoplasmic reticulum	51.75	52.91
AT1G69460.1	Thale cress	endoplasmic reticulum, extracellular, vacuole	49.56	52.8
CDY44411	Canola	golgi, plasma membrane, plastid	51.32	52.7
Bra033081.1-P	Field mustard	golgi, plasma membrane, plastid	51.32	52.7
CDX85243	Canola	mitochondrion	51.32	52.7
KRH70788	Soybean	extracellular	32.89	52.45
Bra016283.1-P	Field mustard	endoplasmic reticulum	49.12	52.34
CDY45170	Canola	endoplasmic reticulum, extracellular	49.12	52.34
CDY61620	Canola	endoplasmic reticulum	49.12	52.34
Bra024781.1-P	Field mustard	endoplasmic reticulum, extracellular	49.12	52.34
CDY09334	Canola	endoplasmic reticulum, extracellular, vacuole	49.56	52.31
Bra026559.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	49.56	52.31
CDY03005	Canola	endoplasmic reticulum, extracellular, plasma membrane	48.68	51.87
CDY53680	Canola	endoplasmic reticulum, extracellular, vacuole	49.12	51.85
CDY24142	Canola	endoplasmic reticulum, plasma membrane, vacuole	48.25	51.4
KRH01218	Soybean	endoplasmic reticulum, plasma membrane, vacuole	48.25	50.46
AT3G29070.1	Thale cress	mitochondrion	48.25	48.89
AT2G03040.1	Thale cress	extracellular	34.65	47.59
TraesCS7B01G074300.1	Wheat	plasma membrane	42.98	45.37
TraesCS6B01G361000.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	40.35	43.6
Bra016715.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	38.16	43.28
TraesCS5B01G233900.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	35.09	38.28

Protein Annotations

EnsemblPlants:TraesCS2B01G180800.1	EnsemblPlantsGene:TraesCS2B01G180800	InterPro:GOLD_dom	InterPro:IPR009038	InterPro:TMP21-related	ncoils:Coil
PANTHER:PTHR22811	PANTHER:PTHR22811:SF112	PFAM:PF01105	PFscan:PS50866	SEG:seg	SignalP:SignalP-noTM
SMART:SM01190	TMHMM:TMhelix	MapMan:22.3.5.2	:	:	:

Description

No Description!

Coordinates

chr2B:-:154930933..154934633

Molecular Weight (calculated)

25690.8 Da

IEP (calculated)

7.633

GRAVY (calculated)

-0.267

Length

228 amino acids

Sequence
(BLAST)

001: MAARRPGSPA PRWLPPSTLL LLAAVLLAAS PSARALRFDL ESGHTKCISD EIKVDSMAVG KYSVVAPDPS YPDAQLPESH RVSLRVTSPY GNSMHYSENV
101: QSGHFAFTAV EAGDYLACFW APDHKPPVTV TFEFDWKSGV TAKDWSNVAK KGKVDMMELE LKKLEDTIKS IHEEMFYLRE REEEMQNINR QTNSRMGWLS
201: FLSLGICLSV AGLQLWHLKT FFERKKLL

Best Arabidopsis Sequence Match ( AT1G26690.1 )
(BLAST)

001: MFLRSLNLCT ILLFLAISSQ VSQSLHFELQ SGRTKCISED IKSNSMTVGK YTVVNPNEAH PSPQSHKISI RVTSSYGNTY HHAEDVESGQ FAFTAVESGD
101: YMACYTAVDH KPEVTLSIDF DWRTGVQSKS WSSVAKKSQV EVMEFDVKRL IETVNSIHEE MFYLREREEE MQNLNRATNS KMAWLSFLSL FVCLGVAGMQ
201: FVHLKTFFEK KKVI

Arabidopsis Description

Transmembrane emp24 domain-containing protein p24delta9 [Source:UniProtKB/Swiss-Prot;Acc:Q9LQY3]
SUBAcon: [endoplasmic reticulum,extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.