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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, extracellular, vacuole

Predictor Summary:
  • plastid 2
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 4
  • golgi 4
  • nucleus 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, extracellular, vacuole
Any Predictor:nucleus, plastid, secretory
BaCelLo:plastid
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Plant-mPloc:nucleus, plastid
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:vacuole
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX96872 Canola endoplasmic reticulum, extracellular, plasma membrane 86.57 81.69
Bra026866.1-P Field mustard endoplasmic reticulum, extracellular, plasma membrane 79.1 75.0
AT1G14010.1 Thale cress endoplasmic reticulum, extracellular, plasma membrane 70.65 66.98
Bra024781.1-P Field mustard endoplasmic reticulum, extracellular 59.2 55.61
Bra026559.1-P Field mustard endoplasmic reticulum, extracellular, vacuole 58.71 54.63
Bra004382.1-P Field mustard endoplasmic reticulum, extracellular, vacuole 54.73 51.16
Bra024694.1-P Field mustard endoplasmic reticulum, plasma membrane 53.73 50.47
KRH50555 Soybean endoplasmic reticulum 52.74 47.96
Bra016283.1-P Field mustard endoplasmic reticulum 50.75 47.66
KRH70788 Soybean extracellular 33.33 46.85
KRG89554 Soybean endoplasmic reticulum 51.24 46.82
VIT_01s0182g00030.t01 Wine grape endoplasmic reticulum, extracellular, plasma membrane 48.76 46.23
GSMUA_Achr1P21760_001 Banana cytosol 38.31 45.56
GSMUA_AchrUn_... Banana cytosol 37.31 44.38
PGSC0003DMT400062438 Potato mitochondrion 47.26 43.98
Solyc05g013130.2.1 Tomato endoplasmic reticulum, extracellular, vacuole 45.77 43.19
PGSC0003DMT400073002 Potato extracellular 45.27 42.72
PGSC0003DMT400007416 Potato endoplasmic reticulum, extracellular, vacuole 45.27 42.52
Solyc01g010940.2.1 Tomato nucleus, plastid 44.78 41.67
Bra033081.1-P Field mustard golgi, plasma membrane, plastid 45.77 41.44
Bra036221.1-P Field mustard endoplasmic reticulum, extracellular 44.28 41.2
Solyc04g005570.2.1 Tomato endoplasmic reticulum, plasma membrane, vacuole 43.78 40.93
EER97600 Sorghum mitochondrion 45.27 39.74
Zm00001d022238_P001 Maize mitochondrion 45.27 39.74
EER92205 Sorghum endoplasmic reticulum, extracellular, plasma membrane 42.29 39.72
Os07t0632700-01 Rice plasma membrane 45.27 39.57
Zm00001d006951_P001 Maize mitochondrion 43.78 38.43
TraesCS2B01G180800.1 Wheat mitochondrion 43.28 38.16
TraesCS2A01G155600.1 Wheat golgi 42.79 37.72
TraesCS2D01G161400.1 Wheat endoplasmic reticulum, plastid 42.79 37.72
Os03t0376000-01 Rice endoplasmic reticulum, plasma membrane 42.79 37.07
HORVU2Hr1G028220.5 Barley endoplasmic reticulum, extracellular 41.79 36.21
Zm00001d047163_P001 Maize endoplasmic reticulum, extracellular, vacuole 41.29 33.47
Bra030786.1-P Field mustard extracellular 29.85 28.44
Bra020010.1-P Field mustard endoplasmic reticulum, extracellular, golgi 29.35 27.83
Bra027911.1-P Field mustard endoplasmic reticulum, extracellular, plasma membrane 27.86 25.93
Bra038147.1-P Field mustard endoplasmic reticulum, extracellular, plasma membrane 27.36 25.58
Bra001380.1-P Field mustard endoplasmic reticulum, extracellular, plasma membrane 27.36 25.35
Bra016401.1-P Field mustard endoplasmic reticulum, extracellular, plasma membrane 29.85 24.79
Bra029868.1-P Field mustard plasma membrane 23.88 22.86
Bra034146.1-P Field mustard endoplasmic reticulum, extracellular, plasma membrane 21.39 21.83
KRH70789 Soybean cytosol, vacuole 6.97 19.18
Bra017957.1-P Field mustard endoplasmic reticulum, golgi, vacuole 23.88 15.43
Protein Annotations
EnsemblPlants:Bra016715.1EnsemblPlants:Bra016715.1-PEnsemblPlantsGene:Bra016715GO:GO:0005575GO:GO:0016020GO:GO:0016021
InterPro:GOLD_domInterPro:IPR009038InterPro:TMP21-relatedPANTHER:PTHR22811PANTHER:PTHR22811:SF47PFAM:PF01105
PFscan:PS50866SEG:segSignalP:SignalP-noTMSMART:SM01190UniParc:UPI0002545C81UniProt:M4DJN7
MapMan:22.3.5.2:::::
Description
AT1G14010 (E=2e-072) | emp24/gp25L/p24 family protein
Coordinates
chrA08:+:19648215..19649823
Molecular Weight (calculated)
22671.9 Da
IEP (calculated)
6.069
GRAVY (calculated)
-0.230
Length
201 amino acids
Sequence
(BLAST)
001: MDLHRSSTII LLILSILSPA TLSMRYELLS GHTKCISEEI HANAMSVGKY SIVNPHEDHP LPASHKITVK VTSPQGTAYH EADGVSTGQF SLTAVETGDY
101: ITCISAVDHK PETMLTIDFD WRTGVHSKDW PSVAKRSQVE NMESEVKKLF DTVTSIHDEM FYLRDRASVL ALEDFLREEE AHLNTRYHVS RTEIVLTSLR
201: F
Best Arabidopsis Sequence Match ( AT2G03040.1 )
(BLAST)
001: MDLRRSSILL LIIALLSPRT LSMRYELKSS KTKCIGEEIH ENAMSIGKYF IVNPNEDHHP LPDSHKIIVK VMPPQGKNLH EADNVEAGQF SFTAYENGSY
101: VACITAIDYK PETTLTIDFD WKTGVHSKEW TNVAKKSQVD MMEYQVKTLM DTVISIHEEM YYLRER
Arabidopsis Description
Emp24/gp25L/p24 family/GOLD family protein [Source:UniProtKB/TrEMBL;Acc:Q9SLM5]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.