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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, extracellular, plasma membrane

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 6
  • vacuole 5
  • plasma membrane 7
  • golgi 5
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, extracellular, plasma membrane
Any Predictor:plastid, secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Plant-mPloc:plasma membrane, plastid
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY23801 Canola endoplasmic reticulum, extracellular, plasma membrane 99.07 99.07
CDY31789 Canola plasma membrane 97.21 97.21
Bra027911.1-P Field mustard endoplasmic reticulum, extracellular, plasma membrane 91.16 90.74
AT1G57620.1 Thale cress endoplasmic reticulum, golgi, plasma membrane 78.6 79.72
Bra030786.1-P Field mustard extracellular 69.3 70.62
Bra020010.1-P Field mustard endoplasmic reticulum, extracellular, golgi 67.91 68.87
KRH48283 Soybean cytosol 24.65 68.83
VIT_12s0034g01440.t01 Wine grape endoplasmic reticulum, extracellular 65.58 65.28
KRH59179 Soybean endoplasmic reticulum 63.72 64.93
TraesCS7D01G170400.1 Wheat cytosol, endoplasmic reticulum, plasma membrane 58.14 64.43
TraesCS7A01G169500.1 Wheat cytosol, endoplasmic reticulum, plasma membrane 58.14 64.43
Solyc10g045640.1.1 Tomato endoplasmic reticulum, extracellular, plasma membrane 62.33 62.62
Zm00001d037163_P002 Maize extracellular, plasma membrane 61.4 62.56
Solyc01g104220.2.1 Tomato endoplasmic reticulum 60.93 61.79
Os06t0210100-01 Rice plastid 60.0 61.72
GSMUA_Achr6P02320_001 Banana endoplasmic reticulum, plasma membrane 61.4 61.11
EER88046 Sorghum endoplasmic reticulum 60.47 60.75
KRH43057 Soybean extracellular 43.72 60.26
PGSC0003DMT400061146 Potato extracellular 58.6 60.0
EES07590 Sorghum endoplasmic reticulum, extracellular, vacuole 57.21 59.42
GSMUA_AchrUn_... Banana endoplasmic reticulum, extracellular, plasma membrane 59.07 58.8
TraesCS6A01G330200.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 57.67 58.77
TraesCS6B01G361000.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 57.67 58.77
TraesCS6D01G309100.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 57.21 58.29
Os02t0768200-01 Rice endoplasmic reticulum, plasma membrane, vacuole 58.6 57.8
TraesCS7B01G074300.1 Wheat plasma membrane 57.67 57.41
KRH10436 Soybean endoplasmic reticulum 57.21 57.21
Zm00001d018194_P001 Maize extracellular 44.65 57.14
GSMUA_Achr10P... Banana endoplasmic reticulum, plasma membrane, vacuole 57.67 56.62
GSMUA_Achr3P20310_001 Banana plasma membrane 56.28 56.02
Zm00001d005857_P001 Maize cytosol, golgi 40.93 54.66
Os09t0453200-00 Rice endoplasmic reticulum, plasma membrane 53.49 54.25
TraesCS5B01G233900.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 52.09 53.59
TraesCS5A01G235500.1 Wheat extracellular, vacuole 51.63 52.86
TraesCS5D01G242600.1 Wheat endoplasmic reticulum 51.63 52.86
EER96837 Sorghum extracellular 50.7 52.4
Bra016401.1-P Field mustard endoplasmic reticulum, extracellular, plasma membrane 57.21 50.83
KRH44035 Soybean endoplasmic reticulum, mitochondrion, plasma membrane 58.14 50.81
HORVU5Hr1G067730.1 Barley cytosol, peroxisome 52.09 49.78
Bra001380.1-P Field mustard endoplasmic reticulum, extracellular, plasma membrane 47.44 47.0
Os08t0469400-00 Rice endoplasmic reticulum, extracellular, vacuole 29.77 46.72
Bra029868.1-P Field mustard plasma membrane 45.12 46.19
HORVU7Hr1G035390.1 Barley mitochondrion, plastid 57.67 45.26
KXG25366 Sorghum plasma membrane 51.16 44.0
Bra034146.1-P Field mustard endoplasmic reticulum, extracellular, plasma membrane 39.53 43.15
Bra024694.1-P Field mustard endoplasmic reticulum, plasma membrane 37.21 37.38
GSMUA_Achr6P10010_001 Banana nucleus, peroxisome, plasma membrane 54.88 37.11
Bra026866.1-P Field mustard endoplasmic reticulum, extracellular, plasma membrane 33.95 34.43
Bra004382.1-P Field mustard endoplasmic reticulum, extracellular, vacuole 34.42 34.42
Bra036221.1-P Field mustard endoplasmic reticulum, extracellular 34.42 34.26
Bra024781.1-P Field mustard endoplasmic reticulum, extracellular 33.49 33.64
Bra016283.1-P Field mustard endoplasmic reticulum 33.49 33.64
Bra033081.1-P Field mustard golgi, plasma membrane, plastid 33.95 32.88
Bra026559.1-P Field mustard endoplasmic reticulum, extracellular, vacuole 32.56 32.41
Bra016715.1-P Field mustard endoplasmic reticulum, extracellular, vacuole 25.58 27.36
Bra017957.1-P Field mustard endoplasmic reticulum, golgi, vacuole 38.14 26.37
Protein Annotations
MapMan:22.3.5.2EnsemblPlantsGene:Bra038147EnsemblPlants:Bra038147.1EnsemblPlants:Bra038147.1-Pncoils:CoilGO:GO:0005575
GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005783GO:GO:0005789GO:GO:0016020
GO:GO:0016021InterPro:GOLD_domInterPro:IPR009038UniProt:M4FAN2PFAM:PF01105PFscan:PS50866
PANTHER:PTHR22811PANTHER:PTHR22811:SF76SMART:SM01190SignalP:SignalP-noTMInterPro:TMP21-relatedTMHMM:TMhelix
UniParc:UPI000253E6ACSEG:seg::::
Description
AT1G57620 (E=4e-093) | emp24/gp25L/p24 family protein
Coordinates
chrScaffold000140:-:67280..68838
Molecular Weight (calculated)
24166.1 Da
IEP (calculated)
5.950
GRAVY (calculated)
0.020
Length
215 amino acids
Sequence
(BLAST)
001: MRREFATTLL LSTLFSFLVP ELIPVGEGVW LNIPKTGTKC VSEEIQSKVV VLADYLVISD EHSIFPTVSV KVTSPYGSVL HHSENATHGQ FAFTTQESGT
101: YLACFEAVGN SHGNNDISIN LDWKTGIAAK DWDSIARKEK IEGVELELRK LEAAVEAIHE NLLYLRNREA DMRIVSENTN SRVAWYSIMS LGICILVTGL
201: QILYLKQYFE RKKLI
Best Arabidopsis Sequence Match ( AT1G57620.1 )
(BLAST)
001: MKKKMIPTTI LLSALIFSLS PICEAVWLTV PHTGSKCVSE EIQSNVIVLA DYLVISEEHS IFPTVSVKVT APYGTVLHHR ENTTNGQFAF TTQESGTYLA
101: CFEADAKSHG NKDFSINIDW KTGIAAKDWD SIARKEKIEG VELEFKKLEG AVEAIHENLI YLRNREAEMR IVSEKTNSRV AWYSIMSLGI CIVVSGLQIL
201: YLKQYFEKKK LI
Arabidopsis Description
CYBTransmembrane emp24 domain-containing protein p24delta4 [Source:UniProtKB/Swiss-Prot;Acc:Q9FVU0]
SUBAcon: [endoplasmic reticulum,golgi,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.