CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
golgi 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH70789	Soybean	cytosol, vacuole	35.06	36.99
KRH59179	Soybean	endoplasmic reticulum	88.31	32.23
Zm00001d005857_P001	Maize	cytosol, golgi	63.64	30.43
TraesCS7A01G169500.1	Wheat	cytosol, endoplasmic reticulum, plasma membrane	71.43	28.35
TraesCS7D01G170400.1	Wheat	cytosol, endoplasmic reticulum, plasma membrane	70.13	27.84
VIT_12s0034g01440.t01	Wine grape	endoplasmic reticulum, extracellular	77.92	27.78
KRH53215	Soybean	endoplasmic reticulum	74.03	26.89
GSMUA_Achr6P02320_001	Banana	endoplasmic reticulum, plasma membrane	75.32	26.85
Os06t0210100-01	Rice	plastid	72.73	26.79
Solyc10g045640.1.1	Tomato	endoplasmic reticulum, extracellular, plasma membrane	74.03	26.64
AT1G57620.1	Thale cress	endoplasmic reticulum, golgi, plasma membrane	72.73	26.42
CDX95293	Canola	endoplasmic reticulum, extracellular, golgi	74.03	26.39
GSMUA_AchrUn_...	Banana	endoplasmic reticulum, extracellular, plasma membrane	74.03	26.39
EER88046	Sorghum	endoplasmic reticulum	72.73	26.17
Bra020010.1-P	Field mustard	endoplasmic reticulum, extracellular, golgi	71.43	25.94
CDY39938	Canola	endoplasmic reticulum, extracellular, plasma membrane	72.73	25.93
Bra027911.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	72.73	25.93
AT1G09580.1	Thale cress	endoplasmic reticulum, golgi, plasma membrane	72.73	25.81
Os02t0768200-01	Rice	endoplasmic reticulum, plasma membrane, vacuole	72.73	25.69
TraesCS6B01G361000.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	70.13	25.59
TraesCS6A01G330200.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	70.13	25.59
TraesCS6D01G309100.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	70.13	25.59
Zm00001d037163_P002	Maize	extracellular, plasma membrane	70.13	25.59
Bra030786.1-P	Field mustard	extracellular	70.13	25.59
KRH64707	Soybean	plasma membrane	71.43	25.58
KRH18772	Soybean	plasma membrane	71.43	25.58
KRH16308	Soybean	endoplasmic reticulum	71.43	25.58
EES07590	Sorghum	endoplasmic reticulum, extracellular, vacuole	67.53	25.12
CDY31789	Canola	plasma membrane	70.13	25.12
TraesCS7B01G074300.1	Wheat	plasma membrane	70.13	25.0
Solyc01g104220.2.1	Tomato	endoplasmic reticulum	68.83	25.0
GSMUA_Achr3P20310_001	Banana	plasma membrane	70.13	25.0
Bra038147.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	68.83	24.65
CDY23801	Canola	endoplasmic reticulum, extracellular, plasma membrane	68.83	24.65
CDX93498	Canola	endoplasmic reticulum, golgi, plasma membrane	71.43	24.55
CDY50894	Canola	endoplasmic reticulum, golgi, plasma membrane	71.43	24.55
KRH13540	Soybean	cytosol	24.68	24.36
PGSC0003DMT400061146	Potato	extracellular	66.23	24.29
CDY20688	Canola	endoplasmic reticulum, golgi, nucleus	70.13	24.11
CDY31078	Canola	endoplasmic reticulum	70.13	24.11
Os09t0453200-00	Rice	endoplasmic reticulum, plasma membrane	66.23	24.06
GSMUA_Achr10P...	Banana	endoplasmic reticulum, plasma membrane, vacuole	67.53	23.74
KRH10436	Soybean	endoplasmic reticulum	66.23	23.72
EER96837	Sorghum	extracellular	63.64	23.56
KRH44035	Soybean	endoplasmic reticulum, mitochondrion, plasma membrane	67.53	21.14
TraesCS5B01G233900.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	55.84	20.57
TraesCS5A01G235500.1	Wheat	extracellular, vacuole	55.84	20.48
TraesCS5D01G242600.1	Wheat	endoplasmic reticulum	55.84	20.48
HORVU7Hr1G035390.1	Barley	mitochondrion, plastid	70.13	19.71
HORVU5Hr1G067730.1	Barley	cytosol, peroxisome	55.84	19.11
KXG25366	Sorghum	plasma membrane	58.44	18.0
GSMUA_Achr6P10010_001	Banana	nucleus, peroxisome, plasma membrane	67.53	16.35
KRH50555	Soybean	endoplasmic reticulum	46.75	16.29
KRG89554	Soybean	endoplasmic reticulum	42.86	15.0
KRH01218	Soybean	endoplasmic reticulum, plasma membrane, vacuole	41.56	14.68
KRH18453	Soybean	golgi, plasma membrane, vacuole	40.26	14.35
KRG93569	Soybean	endoplasmic reticulum, extracellular, plasma membrane	38.96	13.89
Zm00001d018194_P001	Maize	extracellular	28.57	13.1
KRH43057	Soybean	extracellular	18.18	8.97
Os08t0469400-00	Rice	endoplasmic reticulum, extracellular, vacuole	6.49	3.65
KRH70788	Soybean	extracellular	0.0	0.0

Protein Annotations

EMBL:ACUP02004218	EnsemblPlants:KRH48283	EnsemblPlantsGene:GLYMA_07G079900	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150
GO:GO:0016020	GO:GO:0016021	InterPro:GOLD_dom	InterPro:IPR009038	InterPro:TMP21-related	PANTHER:PTHR22811
PANTHER:PTHR22811:SF68	PFAM:PF01105	ProteinID:KRH48283	ProteinID:KRH48283.1	TMHMM:TMhelix	UniParc:UPI00023C73E4
UniProt:I1KII9	MapMan:22.3.5.2	:	:	:	:

Description

hypothetical protein

Coordinates

chr7:-:7266622..7267156

Molecular Weight (calculated)

8967.1 Da

IEP (calculated)

9.068

GRAVY (calculated)

-0.094

Length

77 amino acids

Sequence
(BLAST)

1: MDTYGVELEL RKLEGEVKAI HENLLYLKGR EAEMRTVSEK TNGRVAWFSI ISLAMCIAVS GLQLWYLKQY FQKKNLI

Best Arabidopsis Sequence Match ( AT1G09580.1 )
(BLAST)

001: MKMTAKMRRE FPTAFLLLFL VPVMIPVGEA VWLDVPPTGT KCVSEEIQSN VVVLADYLII SEDHEVMPTI SVKVTSPYGN NLHNMENVTH GQFAFTTQES
101: GNYLACFWAD EKSHGNKNVS INIDWRTGIA AKDWASIAKK EKIEGVELEI RKLEGAVEAI HENILYLRNR EADMRTMSEK TNSRVAWYSI MSLGVCIAVS
201: GFQVLYLKQY FEKKKLI

Arabidopsis Description

Transmembrane emp24 domain-containing protein p24delta3 [Source:UniProtKB/Swiss-Prot;Acc:Q6IDL4]
SUBAcon: [endoplasmic reticulum,golgi,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.