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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • nucleus 2
  • extracellular 6
  • endoplasmic reticulum 5
  • vacuole 4
  • plasma membrane 5
  • golgi 4
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:nucleus, plastid, secretory
BaCelLo:nucleus
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Plant-mPloc:nucleus, plasma membrane, plastid
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:extracellular
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY31078 Canola endoplasmic reticulum 99.53 93.75
CDY20688 Canola endoplasmic reticulum, golgi, nucleus 99.05 93.3
Bra020010.1-P Field mustard endoplasmic reticulum, extracellular, golgi 81.99 81.6
AT1G09580.1 Thale cress endoplasmic reticulum, golgi, plasma membrane 81.04 78.8
KRH48283 Soybean cytosol 25.59 70.13
Bra038147.1-P Field mustard endoplasmic reticulum, extracellular, plasma membrane 70.62 69.3
Bra027911.1-P Field mustard endoplasmic reticulum, extracellular, plasma membrane 70.62 68.98
KRH59179 Soybean endoplasmic reticulum 66.35 66.35
VIT_12s0034g01440.t01 Wine grape endoplasmic reticulum, extracellular 64.93 63.43
TraesCS7D01G170400.1 Wheat cytosol, endoplasmic reticulum, plasma membrane 58.29 63.4
TraesCS7A01G169500.1 Wheat cytosol, endoplasmic reticulum, plasma membrane 58.29 63.4
EES07590 Sorghum endoplasmic reticulum, extracellular, vacuole 61.14 62.32
Solyc10g045640.1.1 Tomato endoplasmic reticulum, extracellular, plasma membrane 63.03 62.15
Os06t0210100-01 Rice plastid 60.66 61.24
Solyc01g104220.2.1 Tomato endoplasmic reticulum 60.66 60.38
Zm00001d037163_P002 Maize extracellular, plasma membrane 60.19 60.19
TraesCS6B01G361000.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 60.19 60.19
TraesCS6A01G330200.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 59.72 59.72
PGSC0003DMT400061146 Potato extracellular 59.24 59.52
Zm00001d018194_P001 Maize extracellular 47.39 59.52
TraesCS6D01G309100.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 59.24 59.24
KRH43057 Soybean extracellular 43.6 58.97
GSMUA_Achr6P02320_001 Banana endoplasmic reticulum, plasma membrane 60.19 58.8
Os02t0768200-01 Rice endoplasmic reticulum, plasma membrane, vacuole 60.66 58.72
EER88046 Sorghum endoplasmic reticulum 59.24 58.41
KRH10436 Soybean endoplasmic reticulum 59.24 58.14
GSMUA_AchrUn_... Banana endoplasmic reticulum, extracellular, plasma membrane 59.24 57.87
TraesCS7B01G074300.1 Wheat plasma membrane 58.77 57.41
GSMUA_Achr10P... Banana endoplasmic reticulum, plasma membrane, vacuole 57.82 55.71
Zm00001d005857_P001 Maize cytosol, golgi 41.23 54.04
EER96837 Sorghum extracellular 53.08 53.85
GSMUA_Achr3P20310_001 Banana plasma membrane 54.5 53.24
Os09t0453200-00 Rice endoplasmic reticulum, plasma membrane 53.08 52.83
TraesCS5B01G233900.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 51.66 52.15
KRH44035 Soybean endoplasmic reticulum, mitochondrion, plasma membrane 59.72 51.22
TraesCS5A01G235500.1 Wheat extracellular, vacuole 50.71 50.95
TraesCS5D01G242600.1 Wheat endoplasmic reticulum 50.71 50.95
Bra016401.1-P Field mustard endoplasmic reticulum, extracellular, plasma membrane 56.87 49.59
Os08t0469400-00 Rice endoplasmic reticulum, extracellular, vacuole 31.28 48.18
HORVU5Hr1G067730.1 Barley cytosol, peroxisome 50.24 47.11
Bra001380.1-P Field mustard endoplasmic reticulum, extracellular, plasma membrane 47.87 46.54
HORVU7Hr1G035390.1 Barley mitochondrion, plastid 58.77 45.26
Bra029868.1-P Field mustard plasma membrane 44.55 44.76
Bra034146.1-P Field mustard endoplasmic reticulum, extracellular, plasma membrane 41.71 44.67
KXG25366 Sorghum plasma membrane 52.13 44.0
GSMUA_Achr6P10010_001 Banana nucleus, peroxisome, plasma membrane 57.82 38.36
Bra024694.1-P Field mustard endoplasmic reticulum, plasma membrane 38.39 37.85
Bra004382.1-P Field mustard endoplasmic reticulum, extracellular, vacuole 38.39 37.67
Bra036221.1-P Field mustard endoplasmic reticulum, extracellular 36.97 36.11
Bra026866.1-P Field mustard endoplasmic reticulum, extracellular, plasma membrane 36.02 35.85
Bra016283.1-P Field mustard endoplasmic reticulum 35.55 35.05
Bra026559.1-P Field mustard endoplasmic reticulum, extracellular, vacuole 35.55 34.72
Bra033081.1-P Field mustard golgi, plasma membrane, plastid 35.55 33.78
Bra024781.1-P Field mustard endoplasmic reticulum, extracellular 32.7 32.24
Bra016715.1-P Field mustard endoplasmic reticulum, extracellular, vacuole 28.44 29.85
Bra017957.1-P Field mustard endoplasmic reticulum, golgi, vacuole 40.76 27.65
Protein Annotations
MapMan:22.3.5.2EnsemblPlantsGene:Bra030786EnsemblPlants:Bra030786.1EnsemblPlants:Bra030786.1-Pncoils:CoilGO:GO:0005575
GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005783GO:GO:0005789GO:GO:0016020
GO:GO:0016021InterPro:GOLD_domInterPro:IPR009038UniProt:M4EPR5PFAM:PF01105PFscan:PS50866
PANTHER:PTHR22811PANTHER:PTHR22811:SF68SMART:SM01190SignalP:SignalP-noTMInterPro:TMP21-relatedTMHMM:TMhelix
UniParc:UPI00025467C2:::::
Description
AT1G09580 (E=9e-099) | emp24/gp25L/p24 family protein
Coordinates
chrA08:-:20371996..20373322
Molecular Weight (calculated)
23538.4 Da
IEP (calculated)
7.235
GRAVY (calculated)
-0.064
Length
211 amino acids
Sequence
(BLAST)
001: MSAKMRHGLT TAILLFILVP VGEAIWLDVP TTGTKCVSEE IQSNIVVLAD YIIISEDHSL KPTISAKVTS PYGNNLHHSE NVTHGEFAFT TKESGNYIAC
101: FWADAKSHGN KDVSINVEWK TGIATKDWAS IAKREKLEGV ELEIRKLEGA VEAIHENLIY LRNKEADMRT VSEKTNSRVA WCSMMSLGIC IVVSGLQVAY
201: LKHYFEKKKL I
Best Arabidopsis Sequence Match ( AT1G09580.1 )
(BLAST)
001: MKMTAKMRRE FPTAFLLLFL VPVMIPVGEA VWLDVPPTGT KCVSEEIQSN VVVLADYLII SEDHEVMPTI SVKVTSPYGN NLHNMENVTH GQFAFTTQES
101: GNYLACFWAD EKSHGNKNVS INIDWRTGIA AKDWASIAKK EKIEGVELEI RKLEGAVEAI HENILYLRNR EADMRTMSEK TNSRVAWYSI MSLGVCIAVS
201: GFQVLYLKQY FEKKKLI
Arabidopsis Description
Transmembrane emp24 domain-containing protein p24delta3 [Source:UniProtKB/Swiss-Prot;Acc:Q6IDL4]
SUBAcon: [endoplasmic reticulum,golgi,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.