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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, extracellular, vacuole

Predictor Summary:
  • plastid 1
  • mitochondrion 1
  • endoplasmic reticulum 4
  • nucleus 1
  • extracellular 4
  • vacuole 4
  • plasma membrane 3
  • golgi 3
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, extracellular, vacuole
Any Predictor:mitochondrion, nucleus, plastid, secretory
BaCelLo:plastid
iPSORT:mitochondrion
MultiLoc:endoplasmic reticulum
Plant-mPloc:nucleus
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:vacuole
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX95934 Canola vacuole 98.14 98.14
AT1G69460.1 Thale cress endoplasmic reticulum, extracellular, vacuole 85.12 85.51
Bra024694.1-P Field mustard endoplasmic reticulum, plasma membrane 73.95 74.3
Bra016283.1-P Field mustard endoplasmic reticulum 67.44 67.76
Bra026866.1-P Field mustard endoplasmic reticulum, extracellular, plasma membrane 62.33 63.21
KRH50555 Soybean endoplasmic reticulum 63.72 61.99
Solyc05g013130.2.1 Tomato endoplasmic reticulum, extracellular, vacuole 60.47 61.03
GSMUA_AchrUn_... Banana cytosol 47.91 60.95
GSMUA_Achr1P21760_001 Banana cytosol 47.91 60.95
KRG89554 Soybean endoplasmic reticulum 61.86 60.45
VIT_01s0182g00030.t01 Wine grape endoplasmic reticulum, extracellular, plasma membrane 59.53 60.38
PGSC0003DMT400073002 Potato extracellular 59.53 60.09
Bra024781.1-P Field mustard endoplasmic reticulum, extracellular 57.67 57.94
Solyc04g005570.2.1 Tomato endoplasmic reticulum, plasma membrane, vacuole 57.67 57.67
PGSC0003DMT400007416 Potato endoplasmic reticulum, extracellular, vacuole 57.21 57.48
Bra026559.1-P Field mustard endoplasmic reticulum, extracellular, vacuole 56.74 56.48
Bra016715.1-P Field mustard endoplasmic reticulum, extracellular, vacuole 51.16 54.73
PGSC0003DMT400062438 Potato mitochondrion 53.02 52.78
EER92205 Sorghum endoplasmic reticulum, extracellular, plasma membrane 52.09 52.34
Bra036221.1-P Field mustard endoplasmic reticulum, extracellular 51.63 51.39
Os07t0632700-01 Rice plasma membrane 54.88 51.3
Zm00001d022238_P001 Maize mitochondrion 54.42 51.09
Solyc01g010940.2.1 Tomato nucleus, plastid 51.16 50.93
TraesCS2B01G180800.1 Wheat mitochondrion 53.95 50.88
EER97600 Sorghum mitochondrion 53.95 50.66
TraesCS2D01G161400.1 Wheat endoplasmic reticulum, plastid 53.49 50.44
TraesCS2A01G155600.1 Wheat golgi 53.49 50.44
Bra033081.1-P Field mustard golgi, plasma membrane, plastid 51.63 50.0
Zm00001d006951_P001 Maize mitochondrion 53.02 49.78
KRH70788 Soybean extracellular 33.02 49.65
HORVU2Hr1G028220.5 Barley endoplasmic reticulum, extracellular 53.49 49.57
Os03t0376000-01 Rice endoplasmic reticulum, plasma membrane 52.56 48.71
KRH70789 Soybean cytosol, vacuole 16.28 47.95
Bra030786.1-P Field mustard extracellular 37.67 38.39
Bra020010.1-P Field mustard endoplasmic reticulum, extracellular, golgi 36.74 37.26
Zm00001d047163_P001 Maize endoplasmic reticulum, extracellular, vacuole 40.93 35.48
Bra027911.1-P Field mustard endoplasmic reticulum, extracellular, plasma membrane 34.88 34.72
Bra038147.1-P Field mustard endoplasmic reticulum, extracellular, plasma membrane 34.42 34.42
Bra016401.1-P Field mustard endoplasmic reticulum, extracellular, plasma membrane 35.81 31.82
Bra001380.1-P Field mustard endoplasmic reticulum, extracellular, plasma membrane 32.09 31.8
Bra029868.1-P Field mustard plasma membrane 27.91 28.57
Bra034146.1-P Field mustard endoplasmic reticulum, extracellular, plasma membrane 25.58 27.92
Bra017957.1-P Field mustard endoplasmic reticulum, golgi, vacuole 21.86 15.11
Protein Annotations
MapMan:22.3.5.2EnsemblPlantsGene:Bra004382EnsemblPlants:Bra004382.1EnsemblPlants:Bra004382.1-PGO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0005737GO:GO:0005783GO:GO:0005789GO:GO:0016020GO:GO:0016021
InterPro:GOLD_domInterPro:IPR009038UniProt:M4CJJ8PFAM:PF01105PFscan:PS50866PANTHER:PTHR22811
PANTHER:PTHR22811:SF47SMART:SM01190SignalP:SignalP-noTMInterPro:TMP21-relatedTMHMM:TMhelixUniParc:UPI0002541842
SEG:seg:::::
Description
AT1G69460 (E=3e-097) | emp24/gp25L/p24 family protein
Coordinates
chrA07:-:18345886..18346851
Molecular Weight (calculated)
24325.1 Da
IEP (calculated)
6.912
GRAVY (calculated)
-0.165
Length
215 amino acids
Sequence
(BLAST)
001: MFLLQSQKLW TVVMILVISS RVAHSLHFDL HSGRTKCIAE DIKSNSMTVG KYSVDNPHEG HDLPQSHKIS VKVTSSSGNA YHHADQVASG QFAFSAVEAG
101: DYMACFSAVD HKPEVTLSID FEWRTGVQSK SWATVAKKSQ VETMEFDVKS LLDTVNSIHE EMFYLREREE EMQDLNRSTN TKMAWLSLLS LFVCIGVAAM
201: QYVHLKTFFE KKKVI
Best Arabidopsis Sequence Match ( AT1G69460.1 )
(BLAST)
001: MFLQSQKLWT MLLILAIWSP ISHSLHFDLH SGRTKCIAED IKSNSMTVGK YNIDNPHEGQ ALPQTHKISV KVTSNSGNNY HHAEQVDSGQ FAFSAVEAGD
101: YMACFTAVDH KPEVSLSIDF EWKTGVQSKS WANVAKKSQV EVMEFEVKSL LDTVNSIHEE MYYLRDREEE MQDLNRSTNT KMAWLSVLSF FVCIGVAGMQ
201: FLHLKTFFEK KKVI
Arabidopsis Description
Transmembrane emp24 domain-containing protein p24delta10 [Source:UniProtKB/Swiss-Prot;Acc:Q8VY92]
SUBAcon: [endoplasmic reticulum,extracellular,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.