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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, extracellular, plasma membrane

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 6
  • vacuole 5
  • plasma membrane 7
  • golgi 5
  • plastid 1
  • nucleus 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, extracellular, plasma membrane
Any Predictor:nucleus, plastid, secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Plant-mPloc:nucleus, plasma membrane, plastid
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY39938 Canola endoplasmic reticulum, extracellular, plasma membrane 100.0 100.0
CDX95293 Canola endoplasmic reticulum, extracellular, golgi 97.22 97.22
Bra038147.1-P Field mustard endoplasmic reticulum, extracellular, plasma membrane 90.74 91.16
AT1G57620.1 Thale cress endoplasmic reticulum, golgi, plasma membrane 80.09 81.6
KRH48283 Soybean cytosol 25.93 72.73
Bra030786.1-P Field mustard extracellular 68.98 70.62
Bra020010.1-P Field mustard endoplasmic reticulum, extracellular, golgi 67.13 68.4
VIT_12s0034g01440.t01 Wine grape endoplasmic reticulum, extracellular 67.59 67.59
TraesCS7A01G169500.1 Wheat cytosol, endoplasmic reticulum, plasma membrane 60.19 67.01
TraesCS7D01G170400.1 Wheat cytosol, endoplasmic reticulum, plasma membrane 59.72 66.49
KRH59179 Soybean endoplasmic reticulum 64.81 66.35
Os06t0210100-01 Rice plastid 62.04 64.11
Zm00001d037163_P002 Maize extracellular, plasma membrane 62.5 63.98
Solyc10g045640.1.1 Tomato endoplasmic reticulum, extracellular, plasma membrane 62.5 63.08
EER88046 Sorghum endoplasmic reticulum 62.04 62.62
Solyc01g104220.2.1 Tomato endoplasmic reticulum 61.11 62.26
TraesCS6A01G330200.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 59.72 61.14
TraesCS6B01G361000.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 59.72 61.14
EES07590 Sorghum endoplasmic reticulum, extracellular, vacuole 58.33 60.87
TraesCS6D01G309100.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 59.26 60.66
GSMUA_Achr6P02320_001 Banana endoplasmic reticulum, plasma membrane 60.65 60.65
PGSC0003DMT400061146 Potato extracellular 58.8 60.48
GSMUA_AchrUn_... Banana endoplasmic reticulum, extracellular, plasma membrane 60.19 60.19
Os02t0768200-01 Rice endoplasmic reticulum, plasma membrane, vacuole 60.65 60.09
KRH43057 Soybean extracellular 43.06 59.62
TraesCS7B01G074300.1 Wheat plasma membrane 59.26 59.26
KRH10436 Soybean endoplasmic reticulum 57.87 58.14
Zm00001d018194_P001 Maize extracellular 44.91 57.74
GSMUA_Achr3P20310_001 Banana plasma membrane 56.94 56.94
GSMUA_Achr10P... Banana endoplasmic reticulum, plasma membrane, vacuole 57.41 56.62
Zm00001d005857_P001 Maize cytosol, golgi 41.2 55.28
Os09t0453200-00 Rice endoplasmic reticulum, plasma membrane 53.7 54.72
TraesCS5B01G233900.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 52.78 54.55
EER96837 Sorghum extracellular 51.85 53.85
TraesCS5A01G235500.1 Wheat extracellular, vacuole 52.31 53.81
TraesCS5D01G242600.1 Wheat endoplasmic reticulum 52.31 53.81
Bra016401.1-P Field mustard endoplasmic reticulum, extracellular, plasma membrane 58.33 52.07
KRH44035 Soybean endoplasmic reticulum, mitochondrion, plasma membrane 58.8 51.63
HORVU5Hr1G067730.1 Barley cytosol, peroxisome 51.85 49.78
Bra029868.1-P Field mustard plasma membrane 46.76 48.1
Bra001380.1-P Field mustard endoplasmic reticulum, extracellular, plasma membrane 48.15 47.93
HORVU7Hr1G035390.1 Barley mitochondrion, plastid 59.72 47.08
Os08t0469400-00 Rice endoplasmic reticulum, extracellular, vacuole 28.7 45.26
KXG25366 Sorghum plasma membrane 52.31 45.2
Bra034146.1-P Field mustard endoplasmic reticulum, extracellular, plasma membrane 41.2 45.18
GSMUA_Achr6P10010_001 Banana nucleus, peroxisome, plasma membrane 55.09 37.42
Bra024694.1-P Field mustard endoplasmic reticulum, plasma membrane 37.04 37.38
Bra026866.1-P Field mustard endoplasmic reticulum, extracellular, plasma membrane 34.26 34.91
Bra004382.1-P Field mustard endoplasmic reticulum, extracellular, vacuole 34.72 34.88
Bra024781.1-P Field mustard endoplasmic reticulum, extracellular 34.26 34.58
Bra016283.1-P Field mustard endoplasmic reticulum 33.33 33.64
Bra036221.1-P Field mustard endoplasmic reticulum, extracellular 33.33 33.33
Bra026559.1-P Field mustard endoplasmic reticulum, extracellular, vacuole 31.94 31.94
Bra033081.1-P Field mustard golgi, plasma membrane, plastid 31.94 31.08
Bra016715.1-P Field mustard endoplasmic reticulum, extracellular, vacuole 25.93 27.86
Bra017957.1-P Field mustard endoplasmic reticulum, golgi, vacuole 39.81 27.65
Protein Annotations
MapMan:22.3.5.2EnsemblPlantsGene:Bra027911EnsemblPlants:Bra027911.1EnsemblPlants:Bra027911.1-Pncoils:CoilGO:GO:0005575
GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005783GO:GO:0005789GO:GO:0016020
GO:GO:0016021InterPro:GOLD_domInterPro:IPR009038UniProt:M4EGJ7PFAM:PF01105PFscan:PS50866
PANTHER:PTHR22811PANTHER:PTHR22811:SF76SMART:SM01190SignalP:SignalP-noTMInterPro:TMP21-relatedTMHMM:TMhelix
UniParc:UPI000254214CSEG:seg::::
Description
AT1G57620 (E=2e-094) | emp24/gp25L/p24 family protein
Coordinates
chrA09:-:9777780..9779092
Molecular Weight (calculated)
24303.3 Da
IEP (calculated)
5.951
GRAVY (calculated)
0.015
Length
216 amino acids
Sequence
(BLAST)
001: MQREFAMTFT LLSALFFLLT PELIPVSEAV WLNIPKTGTK CVSEEIQSKV VVLADYLVIS DEHSIFPTVS VKVTSPYGNV LHHSDNATHG QFAFTTQESG
101: TYLACFEAVG NSHGNKDISI NLDWKTGIAA KDWDSIARKE KIEGVELELR KLEGAVEGIH ENLLYLKDRE ADMRIVSEKT NSRVAWYSIM SLGICIVVSG
201: LQILYLKQYF ERKKLI
Best Arabidopsis Sequence Match ( AT1G57620.1 )
(BLAST)
001: MKKKMIPTTI LLSALIFSLS PICEAVWLTV PHTGSKCVSE EIQSNVIVLA DYLVISEEHS IFPTVSVKVT APYGTVLHHR ENTTNGQFAF TTQESGTYLA
101: CFEADAKSHG NKDFSINIDW KTGIAAKDWD SIARKEKIEG VELEFKKLEG AVEAIHENLI YLRNREAEMR IVSEKTNSRV AWYSIMSLGI CIVVSGLQIL
201: YLKQYFEKKK LI
Arabidopsis Description
CYBTransmembrane emp24 domain-containing protein p24delta4 [Source:UniProtKB/Swiss-Prot;Acc:Q9FVU0]
SUBAcon: [endoplasmic reticulum,golgi,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.