Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular, vacuole
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 6
- golgi 5
- extracellular 6
- vacuole 5
- plasma membrane 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY16181 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 87.38 | 87.38 |
| Bra024694.1-P | Field mustard | endoplasmic reticulum, plasma membrane | 86.92 | 86.92 |
| CDX85047 | Canola | endoplasmic reticulum | 86.92 | 86.92 |
| Bra016283.1-P | Field mustard | endoplasmic reticulum | 78.5 | 78.5 |
| CDY61620 | Canola | endoplasmic reticulum | 78.5 | 78.5 |
| CDY24142 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 77.57 | 77.57 |
| AT1G69460.1 | Thale cress | endoplasmic reticulum, extracellular, vacuole | 76.64 | 76.64 |
| AT1G14010.1 | Thale cress | endoplasmic reticulum, extracellular, plasma membrane | 66.36 | 66.98 |
| VIT_01s0182g00030.t01 | Wine grape | endoplasmic reticulum, extracellular, plasma membrane | 64.49 | 65.09 |
| KRH50555 | Soybean | endoplasmic reticulum | 66.82 | 64.71 |
| KRG89554 | Soybean | endoplasmic reticulum | 65.42 | 63.64 |
| AT2G03290.1 | Thale cress | extracellular | 63.08 | 63.38 |
| GSMUA_Achr1P21760_001 | Banana | cytosol | 49.53 | 62.72 |
| GSMUA_AchrUn_... | Banana | cytosol | 49.07 | 62.13 |
| Solyc05g013130.2.1 | Tomato | endoplasmic reticulum, extracellular, vacuole | 61.22 | 61.5 |
| PGSC0003DMT400073002 | Potato | extracellular | 60.75 | 61.03 |
| PGSC0003DMT400007416 | Potato | endoplasmic reticulum, extracellular, vacuole | 59.35 | 59.35 |
| Solyc04g005570.2.1 | Tomato | endoplasmic reticulum, plasma membrane, vacuole | 58.88 | 58.6 |
| AT2G03040.1 | Thale cress | extracellular | 44.86 | 57.83 |
| EER92205 | Sorghum | endoplasmic reticulum, extracellular, plasma membrane | 57.01 | 57.01 |
| Os07t0632700-01 | Rice | plasma membrane | 60.75 | 56.52 |
| PGSC0003DMT400062438 | Potato | mitochondrion | 55.14 | 54.63 |
| Zm00001d022238_P001 | Maize | mitochondrion | 58.41 | 54.59 |
| TraesCS2B01G180800.1 | Wheat | mitochondrion | 57.94 | 54.39 |
| EER97600 | Sorghum | mitochondrion | 57.94 | 54.15 |
| TraesCS2A01G155600.1 | Wheat | golgi | 57.48 | 53.95 |
| Solyc01g010940.2.1 | Tomato | nucleus, plastid | 54.21 | 53.7 |
| TraesCS2D01G161400.1 | Wheat | endoplasmic reticulum, plastid | 57.01 | 53.51 |
| Zm00001d006951_P001 | Maize | mitochondrion | 57.01 | 53.28 |
| KRH70788 | Soybean | extracellular | 35.51 | 53.15 |
| Os03t0376000-01 | Rice | endoplasmic reticulum, plasma membrane | 57.01 | 52.59 |
| HORVU2Hr1G028220.5 | Barley | endoplasmic reticulum, extracellular | 56.54 | 52.16 |
| KRH70789 | Soybean | cytosol, vacuole | 16.36 | 47.95 |
| AT3G29070.1 | Thale cress | mitochondrion | 49.53 | 47.11 |
| AT1G09580.1 | Thale cress | endoplasmic reticulum, golgi, plasma membrane | 41.12 | 40.55 |
| AT1G21900.1 | Thale cress | plasma membrane | 38.78 | 38.43 |
| AT1G57620.1 | Thale cress | endoplasmic reticulum, golgi, plasma membrane | 37.85 | 38.21 |
| Zm00001d047163_P001 | Maize | endoplasmic reticulum, extracellular, vacuole | 43.93 | 37.9 |
| AT3G10780.1 | Thale cress | endoplasmic reticulum, plasma membrane | 31.31 | 30.88 |
Protein Annotations
| MapMan:22.3.5.2 | EntrezGene:839210 | UniProt:A0A178WJP9 | ProteinID:AAF87046.1 | ProteinID:AEE30721.1 | EMBL:AK118529 |
| ArrayExpress:AT1G26690 | EnsemblPlantsGene:AT1G26690 | RefSeq:AT1G26690 | TAIR:AT1G26690 | RefSeq:AT1G26690-TAIR-G | EnsemblPlants:AT1G26690.1 |
| TAIR:AT1G26690.1 | EMBL:AY084765 | EMBL:BT003733 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005783 | GO:GO:0005789 | GO:GO:0005794 | GO:GO:0006810 | GO:GO:0008150 |
| GO:GO:0015031 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016192 | GO:GO:0032580 | GO:GO:0033116 |
| InterPro:GOLD_dom | InterPro:IPR009038 | RefSeq:NP_564256.1 | ProteinID:OAP17693.1 | PFAM:PF01105 | PO:PO:0000013 |
| PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 |
| PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 |
| PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PFscan:PS50866 |
| PANTHER:PTHR22811 | PANTHER:PTHR22811:SF47 | UniProt:Q9LQY3 | SMART:SM01190 | SignalP:SignalP-noTM | InterPro:TMP21-related |
| TMHMM:TMhelix | UniParc:UPI000009F177 | SEG:seg | : | : | : |
Description
Transmembrane emp24 domain-containing protein p24delta9 [Source:UniProtKB/Swiss-Prot;Acc:Q9LQY3]
Coordinates
chr1:-:9224059..9225792
Molecular Weight (calculated)
24398.1 Da
IEP (calculated)
6.947
GRAVY (calculated)
-0.198
Length
214 amino acids
Sequence
(BLAST)
(BLAST)
001: MFLRSLNLCT ILLFLAISSQ VSQSLHFELQ SGRTKCISED IKSNSMTVGK YTVVNPNEAH PSPQSHKISI RVTSSYGNTY HHAEDVESGQ FAFTAVESGD
101: YMACYTAVDH KPEVTLSIDF DWRTGVQSKS WSSVAKKSQV EVMEFDVKRL IETVNSIHEE MFYLREREEE MQNLNRATNS KMAWLSFLSL FVCLGVAGMQ
201: FVHLKTFFEK KKVI
101: YMACYTAVDH KPEVTLSIDF DWRTGVQSKS WSSVAKKSQV EVMEFDVKRL IETVNSIHEE MFYLREREEE MQNLNRATNS KMAWLSFLSL FVCLGVAGMQ
201: FVHLKTFFEK KKVI
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.