Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 3
- golgi 3
- extracellular 5
- vacuole 3
- plasma membrane 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT2G03290.1 | Thale cress | extracellular | 98.19 | 76.53 |
| CDY45170 | Canola | endoplasmic reticulum, extracellular | 70.48 | 54.67 |
| CDY03005 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 70.48 | 54.67 |
| Bra024781.1-P | Field mustard | endoplasmic reticulum, extracellular | 70.48 | 54.67 |
| AT1G14010.1 | Thale cress | endoplasmic reticulum, extracellular, plasma membrane | 63.86 | 50.0 |
| Bra026559.1-P | Field mustard | endoplasmic reticulum, extracellular, vacuole | 64.46 | 49.54 |
| CDY09334 | Canola | endoplasmic reticulum, extracellular, vacuole | 64.46 | 49.54 |
| CDY53680 | Canola | endoplasmic reticulum, extracellular, vacuole | 63.86 | 49.07 |
| KRH70788 | Soybean | extracellular | 39.76 | 46.15 |
| AT1G26690.1 | Thale cress | endoplasmic reticulum, extracellular, vacuole | 57.83 | 44.86 |
| AT1G69460.1 | Thale cress | endoplasmic reticulum, extracellular, vacuole | 57.23 | 44.39 |
| KRH50555 | Soybean | endoplasmic reticulum | 55.42 | 41.63 |
| GSMUA_AchrUn_... | Banana | cytosol | 41.57 | 40.83 |
| VIT_01s0182g00030.t01 | Wine grape | endoplasmic reticulum, extracellular, plasma membrane | 51.81 | 40.57 |
| KRG89554 | Soybean | endoplasmic reticulum | 53.61 | 40.45 |
| GSMUA_Achr1P21760_001 | Banana | cytosol | 40.36 | 39.65 |
| PGSC0003DMT400062438 | Potato | mitochondrion | 49.4 | 37.96 |
| PGSC0003DMT400007416 | Potato | endoplasmic reticulum, extracellular, vacuole | 48.8 | 37.85 |
| Solyc04g005570.2.1 | Tomato | endoplasmic reticulum, plasma membrane, vacuole | 48.8 | 37.67 |
| PGSC0003DMT400073002 | Potato | extracellular | 48.19 | 37.56 |
| Solyc01g010940.2.1 | Tomato | nucleus, plastid | 48.19 | 37.04 |
| Solyc05g013130.2.1 | Tomato | endoplasmic reticulum, extracellular, vacuole | 46.99 | 36.62 |
| EER92205 | Sorghum | endoplasmic reticulum, extracellular, plasma membrane | 46.39 | 35.98 |
| AT3G29070.1 | Thale cress | mitochondrion | 46.99 | 34.67 |
| TraesCS2B01G180800.1 | Wheat | mitochondrion | 47.59 | 34.65 |
| TraesCS2D01G161400.1 | Wheat | endoplasmic reticulum, plastid | 47.59 | 34.65 |
| Os07t0632700-01 | Rice | plasma membrane | 47.59 | 34.35 |
| TraesCS2A01G155600.1 | Wheat | golgi | 46.99 | 34.21 |
| EER97600 | Sorghum | mitochondrion | 46.39 | 33.62 |
| Zm00001d022238_P001 | Maize | mitochondrion | 46.39 | 33.62 |
| Os03t0376000-01 | Rice | endoplasmic reticulum, plasma membrane | 46.99 | 33.62 |
| HORVU2Hr1G028220.5 | Barley | endoplasmic reticulum, extracellular | 46.39 | 33.19 |
| Zm00001d006951_P001 | Maize | mitochondrion | 45.78 | 33.19 |
| Zm00001d047163_P001 | Maize | endoplasmic reticulum, extracellular, vacuole | 43.37 | 29.03 |
| AT1G09580.1 | Thale cress | endoplasmic reticulum, golgi, plasma membrane | 33.73 | 25.81 |
| AT1G21900.1 | Thale cress | plasma membrane | 31.33 | 24.07 |
| AT1G57620.1 | Thale cress | endoplasmic reticulum, golgi, plasma membrane | 30.72 | 24.06 |
| AT3G10780.1 | Thale cress | endoplasmic reticulum, plasma membrane | 28.31 | 21.66 |
| KRH70789 | Soybean | cytosol, vacuole | 5.42 | 12.33 |
| CDY37184 | Canola | endoplasmic reticulum, peroxisome, plastid | 1.2 | 4.0 |
Protein Annotations
| MapMan:22.3.5.2 | EntrezGene:814833 | ProteinID:AAC32922.1 | ProteinID:AEC05658.1 | ArrayExpress:AT2G03040 | EnsemblPlantsGene:AT2G03040 |
| RefSeq:AT2G03040 | TAIR:AT2G03040 | RefSeq:AT2G03040-TAIR-G | EnsemblPlants:AT2G03040.1 | TAIR:AT2G03040.1 | GO:GO:0005575 |
| GO:GO:0016020 | GO:GO:0016021 | InterPro:GOLD_dom | InterPro:IPR009038 | RefSeq:NP_178404.1 | PFAM:PF01105 |
| PO:PO:0025195 | PFscan:PS50866 | PANTHER:PTHR22811 | PANTHER:PTHR22811:SF47 | UniProt:Q9SLM5 | SMART:SM01190 |
| SignalP:SignalP-noTM | InterPro:TMP21-related | UniParc:UPI000009C837 | SEG:seg | : | : |
Description
Emp24/gp25L/p24 family/GOLD family protein [Source:UniProtKB/TrEMBL;Acc:Q9SLM5]
Coordinates
chr2:-:892666..893588
Molecular Weight (calculated)
19141.0 Da
IEP (calculated)
6.395
GRAVY (calculated)
-0.378
Length
166 amino acids
Sequence
(BLAST)
(BLAST)
001: MDLRRSSILL LIIALLSPRT LSMRYELKSS KTKCIGEEIH ENAMSIGKYF IVNPNEDHHP LPDSHKIIVK VMPPQGKNLH EADNVEAGQF SFTAYENGSY
101: VACITAIDYK PETTLTIDFD WKTGVHSKEW TNVAKKSQVD MMEYQVKTLM DTVISIHEEM YYLRER
101: VACITAIDYK PETTLTIDFD WKTGVHSKEW TNVAKKSQVD MMEYQVKTLM DTVISIHEEM YYLRER
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.