Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- plastid 1
- extracellular 4
- endoplasmic reticulum 6
- vacuole 4
- plasma membrane 5
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY16181 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 98.6 | 98.6 |
| Bra024694.1-P | Field mustard | endoplasmic reticulum, plasma membrane | 98.13 | 98.13 |
| AT1G26690.1 | Thale cress | endoplasmic reticulum, extracellular, vacuole | 86.92 | 86.92 |
| CDY61620 | Canola | endoplasmic reticulum | 79.91 | 79.91 |
| CDY24142 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 78.04 | 78.04 |
| CDY40925 | Canola | endoplasmic reticulum | 73.83 | 73.49 |
| CDX95934 | Canola | vacuole | 73.36 | 73.02 |
| CDY37184 | Canola | endoplasmic reticulum, peroxisome, plastid | 16.82 | 72.0 |
| CDY16125 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 63.08 | 63.68 |
| CDX96872 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 63.08 | 63.38 |
| CDY33785 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 62.62 | 63.21 |
| CDY62212 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 62.62 | 62.91 |
| VIT_01s0182g00030.t01 | Wine grape | endoplasmic reticulum, extracellular, plasma membrane | 62.15 | 62.74 |
| GSMUA_Achr1P21760_001 | Banana | cytosol | 49.07 | 62.13 |
| KRH50555 | Soybean | endoplasmic reticulum | 62.62 | 60.63 |
| Solyc05g013130.2.1 | Tomato | endoplasmic reticulum, extracellular, vacuole | 60.28 | 60.56 |
| GSMUA_AchrUn_... | Banana | cytosol | 47.66 | 60.35 |
| PGSC0003DMT400073002 | Potato | extracellular | 59.81 | 60.09 |
| KRG89554 | Soybean | endoplasmic reticulum | 61.22 | 59.55 |
| CDY09334 | Canola | endoplasmic reticulum, extracellular, vacuole | 59.81 | 59.26 |
| Solyc04g005570.2.1 | Tomato | endoplasmic reticulum, plasma membrane, vacuole | 58.88 | 58.6 |
| PGSC0003DMT400007416 | Potato | endoplasmic reticulum, extracellular, vacuole | 58.41 | 58.41 |
| CDY03005 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 57.94 | 57.94 |
| CDY53680 | Canola | endoplasmic reticulum, extracellular, vacuole | 57.48 | 56.94 |
| CDY45170 | Canola | endoplasmic reticulum, extracellular | 56.54 | 56.54 |
| EER92205 | Sorghum | endoplasmic reticulum, extracellular, plasma membrane | 55.14 | 55.14 |
| Os07t0632700-01 | Rice | plasma membrane | 58.88 | 54.78 |
| CDY00102 | Canola | cytosol | 42.52 | 53.85 |
| PGSC0003DMT400062438 | Potato | mitochondrion | 54.21 | 53.7 |
| Zm00001d022238_P001 | Maize | mitochondrion | 57.01 | 53.28 |
| Solyc01g010940.2.1 | Tomato | nucleus, plastid | 53.74 | 53.24 |
| EER97600 | Sorghum | mitochondrion | 56.54 | 52.84 |
| TraesCS2B01G180800.1 | Wheat | mitochondrion | 56.07 | 52.63 |
| TraesCS2A01G155600.1 | Wheat | golgi | 55.61 | 52.19 |
| Zm00001d006951_P001 | Maize | mitochondrion | 55.61 | 51.97 |
| TraesCS2D01G161400.1 | Wheat | endoplasmic reticulum, plastid | 55.14 | 51.75 |
| CDX85243 | Canola | mitochondrion | 53.27 | 51.35 |
| Os03t0376000-01 | Rice | endoplasmic reticulum, plasma membrane | 55.61 | 51.29 |
| CDY44411 | Canola | golgi, plasma membrane, plastid | 52.34 | 50.45 |
| HORVU2Hr1G028220.5 | Barley | endoplasmic reticulum, extracellular | 54.67 | 50.43 |
| CDY04053 | Canola | endoplasmic reticulum | 52.34 | 50.22 |
| CDY19998 | Canola | endoplasmic reticulum, extracellular | 50.47 | 50.0 |
| KRH70788 | Soybean | extracellular | 32.71 | 48.95 |
| KRH70789 | Soybean | cytosol, vacuole | 15.89 | 46.58 |
| CDY04681 | Canola | endoplasmic reticulum | 37.38 | 38.1 |
| Zm00001d047163_P001 | Maize | endoplasmic reticulum, extracellular, vacuole | 43.93 | 37.9 |
| CDX95293 | Canola | endoplasmic reticulum, extracellular, golgi | 37.38 | 37.04 |
| CDY31789 | Canola | plasma membrane | 36.92 | 36.74 |
| CDY39938 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 36.92 | 36.57 |
| CDY23801 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 36.45 | 36.28 |
| CDY31078 | Canola | endoplasmic reticulum | 37.38 | 35.71 |
| CDY50894 | Canola | endoplasmic reticulum, golgi, plasma membrane | 36.92 | 35.27 |
| CDY20688 | Canola | endoplasmic reticulum, golgi, nucleus | 36.92 | 35.27 |
| CDX93498 | Canola | endoplasmic reticulum, golgi, plasma membrane | 36.45 | 34.82 |
| CDX96570 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 37.38 | 34.33 |
| CDY38827 | Canola | endoplasmic reticulum, extracellular, vacuole | 36.92 | 33.19 |
| CDX73903 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 32.24 | 33.17 |
| CDX73906 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 32.24 | 33.17 |
| CDY00701 | Canola | plasma membrane | 32.24 | 33.17 |
| CDY00971 | Canola | plasma membrane | 31.31 | 31.9 |
| CDY08577 | Canola | plasma membrane | 31.31 | 31.9 |
| CDY08168 | Canola | endoplasmic reticulum | 24.3 | 31.52 |
| CDY36275 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 28.5 | 30.96 |
Protein Annotations
| EnsemblPlants:CDX85047 | EnsemblPlantsGene:GSBRNA2T00142489001 | GO:A0A078D7F4 | InterPro:GOLD_dom | InterPro:IPR009038 | InterPro:TMP21-related |
| PANTHER:PTHR22811 | PANTHER:PTHR22811:SF47 | PFAM:PF01105 | PFscan:PS50866 | ProteinID:CDX85047 | ProteinID:CDX85047.1 |
| SignalP:SignalP-noTM | SMART:SM01190 | TMHMM:TMhelix | UniParc:UPI0004EB2022 | MapMan:22.3.5.2 | : |
Description
BnaC05g20080D
Coordinates
chrLK031839:-:1702202..1703339
Molecular Weight (calculated)
24320.2 Da
IEP (calculated)
7.284
GRAVY (calculated)
-0.199
Length
214 amino acids
Sequence
(BLAST)
(BLAST)
001: MVLRSENLWT FLITVAIICR VSQSLHFELR SGRTKCISED IKSNSMTVGK YTVVNPNEAH PSPPSHKISI RVTSSYGNTF HHAEDVDSGQ FAFTAVEAGD
101: YMACFTANGH KPEVTLSIDF DWRTGIHSKS WGSVAKKSQV EVMEFEVKQL IETVNSIHDE MFYLRDREEE MQNLNRGTNS KMAWLSFLSL FVCLGVAGMQ
201: FMHLKTFLEK KKVI
101: YMACFTANGH KPEVTLSIDF DWRTGIHSKS WGSVAKKSQV EVMEFEVKQL IETVNSIHDE MFYLRDREEE MQNLNRGTNS KMAWLSFLSL FVCLGVAGMQ
201: FMHLKTFLEK KKVI
001: MFLRSLNLCT ILLFLAISSQ VSQSLHFELQ SGRTKCISED IKSNSMTVGK YTVVNPNEAH PSPQSHKISI RVTSSYGNTY HHAEDVESGQ FAFTAVESGD
101: YMACYTAVDH KPEVTLSIDF DWRTGVQSKS WSSVAKKSQV EVMEFDVKRL IETVNSIHEE MFYLREREEE MQNLNRATNS KMAWLSFLSL FVCLGVAGMQ
201: FVHLKTFFEK KKVI
101: YMACYTAVDH KPEVTLSIDF DWRTGVQSKS WSSVAKKSQV EVMEFDVKRL IETVNSIHEE MFYLREREEE MQNLNRATNS KMAWLSFLSL FVCLGVAGMQ
201: FVHLKTFFEK KKVI
Arabidopsis Description
Transmembrane emp24 domain-containing protein p24delta9 [Source:UniProtKB/Swiss-Prot;Acc:Q9LQY3]
SUBAcon: [endoplasmic reticulum,extracellular,vacuole]
SUBAcon: [endoplasmic reticulum,extracellular,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.