CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, extracellular, plasma membrane

Predictor Summary:

extracellular 6
endoplasmic reticulum 6
vacuole 5
plasma membrane 6
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular, plasma membrane
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra016401.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	99.57	95.87
CDY38827	Canola	endoplasmic reticulum, extracellular, vacuole	93.56	91.6
CDY04681	Canola	endoplasmic reticulum	73.39	81.43
AT1G21900.1	Thale cress	plasma membrane	74.68	80.56
CDY08168	Canola	endoplasmic reticulum	48.93	69.09
KRH53215	Soybean	endoplasmic reticulum	57.51	63.21
Solyc11g013000.1.1	Tomato	plastid	56.22	62.38
GSMUA_Achr6P02320_001	Banana	endoplasmic reticulum, plasma membrane	57.08	61.57
KRH64707	Soybean	plasma membrane	56.65	61.4
PGSC0003DMT400002378	Potato	endoplasmic reticulum, extracellular, plasma membrane	54.94	60.95
TraesCS7D01G170400.1	Wheat	cytosol, endoplasmic reticulum, plasma membrane	50.64	60.82
TraesCS7A01G169500.1	Wheat	cytosol, endoplasmic reticulum, plasma membrane	50.64	60.82
GSMUA_AchrUn_...	Banana	endoplasmic reticulum, extracellular, plasma membrane	56.22	60.65
KRH18772	Soybean	plasma membrane	54.08	58.6
Os06t0210100-01	Rice	plastid	52.36	58.37
CDX95293	Canola	endoplasmic reticulum, extracellular, golgi	54.08	58.33
CDY39938	Canola	endoplasmic reticulum, extracellular, plasma membrane	54.08	58.33
KRH16308	Soybean	endoplasmic reticulum	53.65	58.14
CDY37184	Canola	endoplasmic reticulum, peroxisome, plastid	12.45	58.0
CDY31789	Canola	plasma membrane	53.22	57.67
EES07590	Sorghum	endoplasmic reticulum, extracellular, vacuole	50.64	57.0
TraesCS6D01G309100.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	51.5	56.87
TraesCS6B01G361000.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	51.5	56.87
TraesCS6A01G330200.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	51.07	56.4
CDY23801	Canola	endoplasmic reticulum, extracellular, plasma membrane	51.93	56.28
GSMUA_Achr3P20310_001	Banana	plasma membrane	51.93	56.02
Zm00001d037163_P002	Maize	extracellular, plasma membrane	50.64	55.92
EER88046	Sorghum	endoplasmic reticulum	51.07	55.61
Os02t0768200-01	Rice	endoplasmic reticulum, plasma membrane, vacuole	51.93	55.5
TraesCS7B01G074300.1	Wheat	plasma membrane	51.07	55.09
PGSC0003DMT400045273	Potato	endoplasmic reticulum, extracellular, plasma membrane	49.36	54.76
TraesCS5B01G233900.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	48.93	54.55
Zm00001d018194_P001	Maize	extracellular	39.06	54.17
CDX93498	Canola	endoplasmic reticulum, golgi, plasma membrane	51.93	54.02
TraesCS5A01G235500.1	Wheat	extracellular, vacuole	48.5	53.81
TraesCS5D01G242600.1	Wheat	endoplasmic reticulum	48.5	53.81
PGSC0003DMT400045277	Potato	extracellular	49.36	53.74
VIT_18s0001g03200.t01	Wine grape	endoplasmic reticulum	46.78	53.69
CDY31078	Canola	endoplasmic reticulum	51.5	53.57
CDY20688	Canola	endoplasmic reticulum, golgi, nucleus	51.5	53.57
CDY50894	Canola	endoplasmic reticulum, golgi, plasma membrane	51.07	53.12
GSMUA_Achr10P...	Banana	endoplasmic reticulum, plasma membrane, vacuole	49.79	52.97
Os09t0453200-00	Rice	endoplasmic reticulum, plasma membrane	48.07	52.83
PGSC0003DMT400045270	Potato	endoplasmic reticulum, extracellular, plasma membrane	48.5	52.56
Solyc06g060440.1.1	Tomato	endoplasmic reticulum, extracellular, plasma membrane	47.64	52.11
Solyc06g060450.2.1	Tomato	endoplasmic reticulum, extracellular, plasma membrane	48.07	52.09
EER96837	Sorghum	extracellular	45.92	51.44
Zm00001d005857_P001	Maize	cytosol, golgi	35.19	50.93
HORVU5Hr1G067730.1	Barley	cytosol, peroxisome	47.64	49.33
Os08t0469400-00	Rice	endoplasmic reticulum, extracellular, vacuole	27.9	47.45
Solyc06g060430.1.1	Tomato	cytosol	18.03	45.65
CDY08577	Canola	plasma membrane	40.77	45.24
CDY00971	Canola	plasma membrane	40.77	45.24
CDX73906	Canola	endoplasmic reticulum, extracellular, plasma membrane	39.91	44.71
CDX73903	Canola	endoplasmic reticulum, extracellular, plasma membrane	39.91	44.71
CDY36275	Canola	endoplasmic reticulum, extracellular, plasma membrane	37.34	44.16
HORVU7Hr1G035390.1	Barley	mitochondrion, plastid	51.5	43.8
CDY00701	Canola	plasma membrane	39.06	43.75
KXG25366	Sorghum	plasma membrane	43.35	40.4
CDY16125	Canola	endoplasmic reticulum, extracellular, plasma membrane	36.48	40.09
CDY33785	Canola	endoplasmic reticulum, extracellular, plasma membrane	36.05	39.62
CDX96872	Canola	endoplasmic reticulum, extracellular, plasma membrane	36.05	39.44
CDY62212	Canola	endoplasmic reticulum, extracellular, plasma membrane	35.62	38.97
CDY16181	Canola	endoplasmic reticulum, plasma membrane, vacuole	34.76	37.85
CDX85047	Canola	endoplasmic reticulum	34.33	37.38
CDX95934	Canola	vacuole	33.48	36.28
CDY03005	Canola	endoplasmic reticulum, extracellular, plasma membrane	33.05	35.98
CDY09334	Canola	endoplasmic reticulum, extracellular, vacuole	33.05	35.65
CDY40925	Canola	endoplasmic reticulum	32.62	35.35
CDY45170	Canola	endoplasmic reticulum, extracellular	32.19	35.05
CDY00102	Canola	cytosol	25.32	34.91
GSMUA_Achr6P10010_001	Banana	nucleus, peroxisome, plasma membrane	47.21	34.59
CDY61620	Canola	endoplasmic reticulum	31.76	34.58
CDY24142	Canola	endoplasmic reticulum, plasma membrane, vacuole	31.33	34.11
CDY53680	Canola	endoplasmic reticulum, extracellular, vacuole	31.33	33.8
CDX85243	Canola	mitochondrion	31.33	32.88
CDY19998	Canola	endoplasmic reticulum, extracellular	30.04	32.41
CDY44411	Canola	golgi, plasma membrane, plastid	30.47	31.98
CDY04053	Canola	endoplasmic reticulum	30.47	31.84

Protein Annotations

EnsemblPlants:CDX96570	EnsemblPlantsGene:GSBRNA2T00102764001	GO:A0A078E3Q5	InterPro:GOLD_dom	InterPro:IPR009038	InterPro:TMP21-related
PANTHER:PTHR22811	PANTHER:PTHR22811:SF76	PFAM:PF01105	PFscan:PS50866	ProteinID:CDX96570	ProteinID:CDX96570.1
SignalP:SignalP-noTM	SMART:SM01190	TMHMM:TMhelix	UniParc:UPI0004EE903E	MapMan:22.3.5.2	:

Description

BnaA08g21130D

Coordinates

chrLK031895:+:64627..65868

Molecular Weight (calculated)

25998.2 Da

IEP (calculated)

6.236

GRAVY (calculated)

0.066

Length

233 amino acids

Sequence
(BLAST)

001: MAIRGIFTIS TVVLFLLTVN HGEAIWLTIP ATGGTKCVSE EIQSNVVVMA DYYVVDEQNP GNTPAVSAKV TSPYGNDLHH QDNVTHGQFA FTTQETGNYL
101: ACFSVDSSHP LPNPLTLGID WKTGIAAKDW DSVAKKEKIE ASYIYINISS LFFFVMCCYI GVELQLTRLE GLVQAIRENI EYIKNREGEM REVSEATNAR
201: VAWFSIMSLG VCLSAAGAQI WYLKRYFHKK KLI

Best Arabidopsis Sequence Match ( AT1G21900.1 )
(BLAST)

001: MAINRIAHGS LFLTVVLFFL TVNYGEAIWL TIPTTGGTKC VSEEIQSNVV VLADYYVVDE HNPENTPAVS SKVTSPYGNN LHHQENVTHG QFAFTTQEAG
101: NYLACFWIDS SHHLANPITL GVDWKMGIAA KDWDSVAKKE KIEGVELQLR RLEGLVLSIR ENLNYIKDRE AEMREVSETT NSRVAWFSIM SLGVCVVVVG
201: SQILYLKRYF HKKKLI

Arabidopsis Description

Transmembrane emp24 domain-containing protein p24delta5 [Source:UniProtKB/Swiss-Prot;Acc:Q8RWM6]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.