Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 4
- endoplasmic reticulum 7
- vacuole 4
- plasma membrane 5
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7A01G169500.1 | Wheat | cytosol, endoplasmic reticulum, plasma membrane | 59.11 | 61.86 |
| TraesCS7D01G170400.1 | Wheat | cytosol, endoplasmic reticulum, plasma membrane | 57.64 | 60.31 |
| Os06t0210100-01 | Rice | plastid | 60.1 | 58.37 |
| VIT_12s0034g01440.t01 | Wine grape | endoplasmic reticulum, extracellular | 62.07 | 58.33 |
| KRH53215 | Soybean | endoplasmic reticulum | 60.1 | 57.55 |
| KRH64707 | Soybean | plasma membrane | 60.59 | 57.21 |
| TraesCS6B01G361000.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 59.11 | 56.87 |
| TraesCS6D01G309100.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 58.62 | 56.4 |
| TraesCS6A01G330200.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 58.62 | 56.4 |
| Zm00001d037163_P002 | Maize | extracellular, plasma membrane | 58.62 | 56.4 |
| EER88046 | Sorghum | endoplasmic reticulum | 59.11 | 56.07 |
| Os02t0768200-01 | Rice | endoplasmic reticulum, plasma membrane, vacuole | 60.1 | 55.96 |
| EES07590 | Sorghum | endoplasmic reticulum, extracellular, vacuole | 56.65 | 55.56 |
| TraesCS7B01G074300.1 | Wheat | plasma membrane | 59.11 | 55.56 |
| KRH18772 | Soybean | plasma membrane | 58.62 | 55.35 |
| PGSC0003DMT400002378 | Potato | endoplasmic reticulum, extracellular, plasma membrane | 57.14 | 55.24 |
| Solyc11g013000.1.1 | Tomato | plastid | 57.14 | 55.24 |
| GSMUA_Achr6P02320_001 | Banana | endoplasmic reticulum, plasma membrane | 58.62 | 55.09 |
| KRH16308 | Soybean | endoplasmic reticulum | 58.13 | 54.88 |
| GSMUA_AchrUn_... | Banana | endoplasmic reticulum, extracellular, plasma membrane | 58.13 | 54.63 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum, plasma membrane, vacuole | 58.62 | 54.34 |
| GSMUA_Achr3P20310_001 | Banana | plasma membrane | 57.14 | 53.7 |
| Zm00001d005857_P001 | Maize | cytosol, golgi | 41.87 | 52.8 |
| AT1G21900.1 | Thale cress | plasma membrane | 54.68 | 51.39 |
| Zm00001d018194_P001 | Maize | extracellular | 41.87 | 50.6 |
| CDY04681 | Canola | endoplasmic reticulum | 52.22 | 50.48 |
| PGSC0003DMT400045273 | Potato | endoplasmic reticulum, extracellular, plasma membrane | 51.72 | 50.0 |
| EER96837 | Sorghum | extracellular | 51.23 | 50.0 |
| TraesCS5B01G233900.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 51.23 | 49.76 |
| Os09t0453200-00 | Rice | endoplasmic reticulum, plasma membrane | 50.74 | 48.58 |
| TraesCS5A01G235500.1 | Wheat | extracellular, vacuole | 50.25 | 48.57 |
| TraesCS5D01G242600.1 | Wheat | endoplasmic reticulum | 50.25 | 48.57 |
| PGSC0003DMT400045270 | Potato | endoplasmic reticulum, extracellular, plasma membrane | 50.25 | 47.44 |
| Solyc06g060440.1.1 | Tomato | endoplasmic reticulum, extracellular, plasma membrane | 49.26 | 46.95 |
| CDX96570 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 53.69 | 46.78 |
| PGSC0003DMT400045277 | Potato | extracellular | 48.28 | 45.79 |
| HORVU5Hr1G067730.1 | Barley | cytosol, peroxisome | 50.74 | 45.78 |
| CDY08168 | Canola | endoplasmic reticulum | 36.95 | 45.45 |
| CDY38827 | Canola | endoplasmic reticulum, extracellular, vacuole | 53.2 | 45.38 |
| Bra016401.1-P | Field mustard | endoplasmic reticulum, extracellular, plasma membrane | 53.69 | 45.04 |
| Solyc06g060450.2.1 | Tomato | endoplasmic reticulum, extracellular, plasma membrane | 47.29 | 44.65 |
| Solyc06g060430.1.1 | Tomato | cytosol | 20.2 | 44.57 |
| HORVU7Hr1G035390.1 | Barley | mitochondrion, plastid | 59.11 | 43.8 |
| VIT_01s0182g00030.t01 | Wine grape | endoplasmic reticulum, extracellular, plasma membrane | 40.39 | 38.68 |
| VIT_14s0108g01140.t01 | Wine grape | extracellular | 38.92 | 37.62 |
| GSMUA_Achr6P10010_001 | Banana | nucleus, peroxisome, plasma membrane | 57.64 | 36.79 |
| KXG25366 | Sorghum | plasma membrane | 44.34 | 36.0 |
| Os08t0469400-00 | Rice | endoplasmic reticulum, extracellular, vacuole | 24.14 | 35.77 |
| Bra017957.1-P | Field mustard | endoplasmic reticulum, golgi, vacuole | 36.45 | 23.79 |
Protein Annotations
| EntrezGene:100247281 | wikigene:100247281 | MapMan:22.3.5.2 | ProteinID:CCB45497 | ProteinID:CCB45497.1 | UniProt:F6H0S8 |
| EMBL:FN595227 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | InterPro:GOLD_dom | InterPro:IPR009038 |
| EntrezGene:LOC100247281 | wikigene:LOC100247281 | PFAM:PF01105 | PFscan:PS50866 | PANTHER:PTHR22811 | PANTHER:PTHR22811:SF68 |
| SMART:SM01190 | SignalP:SignalP-noTM | InterPro:TMP21-related | TMHMM:TMhelix | UniParc:UPI000210A331 | ArrayExpress:VIT_18s0001g03200 |
| EnsemblPlantsGene:VIT_18s0001g03200 | EnsemblPlants:VIT_18s0001g03200.t01 | RefSeq:XP_003634458 | RefSeq:XP_003634458.1 | : | : |
Description
No Description!
Coordinates
chr18:-:3198754..3201304
Molecular Weight (calculated)
22710.4 Da
IEP (calculated)
6.156
GRAVY (calculated)
-0.003
Length
203 amino acids
Sequence
(BLAST)
(BLAST)
001: MAESGIMLLA ATMIMIWWAT PSQAIWLSLP SSGTKCVSEE IHNNVVVLLD YSLVLGGDDD PSHPTTISVR QEKVTKGQSA FTTSESGAHV ACFWLDGNHE
101: EGAGRTIDID WKIGITAKDW DSVAKKEKIE GVEFELRKLE GIVNAIHENI IFLKEREAKM REVSETTNSR VAWFSLMSLG VCIVVAALQL WHLQHFFRKK
201: KLI
101: EGAGRTIDID WKIGITAKDW DSVAKKEKIE GVEFELRKLE GIVNAIHENI IFLKEREAKM REVSETTNSR VAWFSLMSLG VCIVVAALQL WHLQHFFRKK
201: KLI
001: MAINRIAHGS LFLTVVLFFL TVNYGEAIWL TIPTTGGTKC VSEEIQSNVV VLADYYVVDE HNPENTPAVS SKVTSPYGNN LHHQENVTHG QFAFTTQEAG
101: NYLACFWIDS SHHLANPITL GVDWKMGIAA KDWDSVAKKE KIEGVELQLR RLEGLVLSIR ENLNYIKDRE AEMREVSETT NSRVAWFSIM SLGVCVVVVG
201: SQILYLKRYF HKKKLI
101: NYLACFWIDS SHHLANPITL GVDWKMGIAA KDWDSVAKKE KIEGVELQLR RLEGLVLSIR ENLNYIKDRE AEMREVSETT NSRVAWFSIM SLGVCVVVVG
201: SQILYLKRYF HKKKLI
Arabidopsis Description
Transmembrane emp24 domain-containing protein p24delta5 [Source:UniProtKB/Swiss-Prot;Acc:Q8RWM6]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.