Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 2
- mitochondrion 1
- extracellular 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400045270 | Potato | endoplasmic reticulum, extracellular, plasma membrane | 71.74 | 30.7 |
| Solyc06g060450.2.1 | Tomato | endoplasmic reticulum, extracellular, plasma membrane | 63.04 | 26.98 |
| Solyc06g060440.1.1 | Tomato | endoplasmic reticulum, extracellular, plasma membrane | 60.87 | 26.29 |
| Zm00001d005857_P001 | Maize | cytosol, golgi | 41.3 | 23.6 |
| Solyc01g104220.2.1 | Tomato | endoplasmic reticulum | 54.35 | 23.58 |
| Solyc11g013000.1.1 | Tomato | plastid | 52.17 | 22.86 |
| TraesCS5D01G242600.1 | Wheat | endoplasmic reticulum | 50.0 | 21.9 |
| TraesCS7A01G169500.1 | Wheat | cytosol, endoplasmic reticulum, plasma membrane | 45.65 | 21.65 |
| TraesCS5B01G233900.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 48.91 | 21.53 |
| KRH53215 | Soybean | endoplasmic reticulum | 48.91 | 21.23 |
| TraesCS7D01G170400.1 | Wheat | cytosol, endoplasmic reticulum, plasma membrane | 44.57 | 21.13 |
| TraesCS5A01G235500.1 | Wheat | extracellular, vacuole | 47.83 | 20.95 |
| KRH64707 | Soybean | plasma membrane | 48.91 | 20.93 |
| GSMUA_Achr6P02320_001 | Banana | endoplasmic reticulum, plasma membrane | 48.91 | 20.83 |
| Solyc10g045640.1.1 | Tomato | endoplasmic reticulum, extracellular, plasma membrane | 47.83 | 20.56 |
| GSMUA_AchrUn_... | Banana | endoplasmic reticulum, extracellular, plasma membrane | 47.83 | 20.37 |
| VIT_18s0001g03200.t01 | Wine grape | endoplasmic reticulum | 44.57 | 20.2 |
| Os06t0210100-01 | Rice | plastid | 45.65 | 20.1 |
| KRH18772 | Soybean | plasma membrane | 46.74 | 20.0 |
| KRH16308 | Soybean | endoplasmic reticulum | 46.74 | 20.0 |
| AT1G21900.1 | Thale cress | plasma membrane | 46.74 | 19.91 |
| GSMUA_Achr3P20310_001 | Banana | plasma membrane | 46.74 | 19.91 |
| Zm00001d037163_P002 | Maize | extracellular, plasma membrane | 44.57 | 19.43 |
| Os02t0768200-01 | Rice | endoplasmic reticulum, plasma membrane, vacuole | 45.65 | 19.27 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum, plasma membrane, vacuole | 45.65 | 19.18 |
| EER88046 | Sorghum | endoplasmic reticulum | 44.57 | 19.16 |
| TraesCS7B01G074300.1 | Wheat | plasma membrane | 44.57 | 18.98 |
| TraesCS6D01G309100.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 43.48 | 18.96 |
| TraesCS6B01G361000.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 43.48 | 18.96 |
| TraesCS6A01G330200.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 43.48 | 18.96 |
| EES07590 | Sorghum | endoplasmic reticulum, extracellular, vacuole | 42.39 | 18.84 |
| EER96837 | Sorghum | extracellular | 42.39 | 18.75 |
| CDY04681 | Canola | endoplasmic reticulum | 42.39 | 18.57 |
| HORVU5Hr1G067730.1 | Barley | cytosol, peroxisome | 44.57 | 18.22 |
| CDX96570 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 45.65 | 18.03 |
| CDY38827 | Canola | endoplasmic reticulum, extracellular, vacuole | 45.65 | 17.65 |
| Bra016401.1-P | Field mustard | endoplasmic reticulum, extracellular, plasma membrane | 45.65 | 17.36 |
| Os09t0453200-00 | Rice | endoplasmic reticulum, plasma membrane | 39.13 | 16.98 |
| CDY08168 | Canola | endoplasmic reticulum | 28.26 | 15.76 |
| HORVU7Hr1G035390.1 | Barley | mitochondrion, plastid | 45.65 | 15.33 |
| KXG25366 | Sorghum | plasma membrane | 40.22 | 14.8 |
| Zm00001d018194_P001 | Maize | extracellular | 25.0 | 13.69 |
| Solyc04g005570.2.1 | Tomato | endoplasmic reticulum, plasma membrane, vacuole | 31.52 | 13.49 |
| GSMUA_Achr6P10010_001 | Banana | nucleus, peroxisome, plasma membrane | 44.57 | 12.89 |
| Solyc05g013130.2.1 | Tomato | endoplasmic reticulum, extracellular, vacuole | 28.26 | 12.21 |
| Solyc01g010940.2.1 | Tomato | nucleus, plastid | 28.26 | 12.04 |
| Os08t0469400-00 | Rice | endoplasmic reticulum, extracellular, vacuole | 11.96 | 8.03 |
| Bra017957.1-P | Field mustard | endoplasmic reticulum, golgi, vacuole | 23.91 | 7.07 |
Protein Annotations
| EnsemblPlants:Solyc06g060430.1.1 | EnsemblPlantsGene:Solyc06g060430.1 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | InterPro:GOLD_dom |
| InterPro:IPR009038 | InterPro:TMP21-related | PANTHER:PTHR22811 | PANTHER:PTHR22811:SF58 | PFAM:PF01105 | TMHMM:TMhelix |
| UniParc:UPI000276615F | UniProt:K4C6M3 | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chr6:+:38468485..38469076
Molecular Weight (calculated)
10466.0 Da
IEP (calculated)
9.907
GRAVY (calculated)
0.205
Length
92 amino acids
Sequence
(BLAST)
(BLAST)
1: MYSHVLGNKS VAISLQWKIG IDAKDWDSIA RKEKIQVHND ITLLPVPISV PLLESTNEAV AWFSMMSLSI CIMSAAVQIL YSKRYFRKKN LI
001: MKKKMIPTTI LLSALIFSLS PICEAVWLTV PHTGSKCVSE EIQSNVIVLA DYLVISEEHS IFPTVSVKVT APYGTVLHHR ENTTNGQFAF TTQESGTYLA
101: CFEADAKSHG NKDFSINIDW KTGIAAKDWD SIARKEKIEG VELEFKKLEG AVEAIHENLI YLRNREAEMR IVSEKTNSRV AWYSIMSLGI CIVVSGLQIL
201: YLKQYFEKKK LI
101: CFEADAKSHG NKDFSINIDW KTGIAAKDWD SIARKEKIEG VELEFKKLEG AVEAIHENLI YLRNREAEMR IVSEKTNSRV AWYSIMSLGI CIVVSGLQIL
201: YLKQYFEKKK LI
Arabidopsis Description
CYBTransmembrane emp24 domain-containing protein p24delta4 [Source:UniProtKB/Swiss-Prot;Acc:Q9FVU0]
SUBAcon: [endoplasmic reticulum,golgi,plasma membrane]
SUBAcon: [endoplasmic reticulum,golgi,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.