CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

extracellular 5
endoplasmic reticulum 7
vacuole 5
plasma membrane 6
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT1G21900.1	Thale cress	plasma membrane	84.29	81.94
CDY08168	Canola	endoplasmic reticulum	61.9	78.79
CDX96570	Canola	endoplasmic reticulum, extracellular, plasma membrane	81.43	73.39
CDY38827	Canola	endoplasmic reticulum, extracellular, vacuole	81.9	72.27
CDY37184	Canola	endoplasmic reticulum, peroxisome, plastid	14.29	60.0
KRH53215	Soybean	endoplasmic reticulum	60.48	59.91
TraesCS7A01G169500.1	Wheat	cytosol, endoplasmic reticulum, plasma membrane	54.76	59.28
TraesCS7D01G170400.1	Wheat	cytosol, endoplasmic reticulum, plasma membrane	54.76	59.28
Solyc11g013000.1.1	Tomato	plastid	59.05	59.05
PGSC0003DMT400002378	Potato	endoplasmic reticulum, extracellular, plasma membrane	59.05	59.05
CDX95293	Canola	endoplasmic reticulum, extracellular, golgi	60.48	58.8
GSMUA_AchrUn_...	Banana	endoplasmic reticulum, extracellular, plasma membrane	60.0	58.33
GSMUA_Achr6P02320_001	Banana	endoplasmic reticulum, plasma membrane	60.0	58.33
CDY39938	Canola	endoplasmic reticulum, extracellular, plasma membrane	60.0	58.33
KRH64707	Soybean	plasma membrane	59.05	57.67
CDY31789	Canola	plasma membrane	59.05	57.67
Os06t0210100-01	Rice	plastid	56.67	56.94
Zm00001d037163_P002	Maize	extracellular, plasma membrane	56.67	56.4
TraesCS6B01G361000.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	56.67	56.4
CDY23801	Canola	endoplasmic reticulum, extracellular, plasma membrane	57.62	56.28
EER88046	Sorghum	endoplasmic reticulum	57.14	56.07
TraesCS6D01G309100.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	56.19	55.92
TraesCS6A01G330200.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	56.19	55.92
KRH18772	Soybean	plasma membrane	57.14	55.81
EES07590	Sorghum	endoplasmic reticulum, extracellular, vacuole	54.76	55.56
Os02t0768200-01	Rice	endoplasmic reticulum, plasma membrane, vacuole	57.14	55.05
CDY20688	Canola	endoplasmic reticulum, golgi, nucleus	58.57	54.91
CDY31078	Canola	endoplasmic reticulum	58.57	54.91
KRH16308	Soybean	endoplasmic reticulum	56.19	54.88
TraesCS7B01G074300.1	Wheat	plasma membrane	55.24	53.7
TraesCS5D01G242600.1	Wheat	endoplasmic reticulum	53.33	53.33
TraesCS5A01G235500.1	Wheat	extracellular, vacuole	53.33	53.33
GSMUA_Achr3P20310_001	Banana	plasma membrane	54.76	53.24
TraesCS5B01G233900.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	52.86	53.11
Zm00001d018194_P001	Maize	extracellular	42.38	52.98
CDX93498	Canola	endoplasmic reticulum, golgi, plasma membrane	55.71	52.23
CDY50894	Canola	endoplasmic reticulum, golgi, plasma membrane	55.71	52.23
VIT_18s0001g03200.t01	Wine grape	endoplasmic reticulum	50.48	52.22
EER96837	Sorghum	extracellular	50.48	50.96
PGSC0003DMT400045277	Potato	extracellular	51.43	50.47
GSMUA_Achr10P...	Banana	endoplasmic reticulum, plasma membrane, vacuole	52.38	50.23
Os09t0453200-00	Rice	endoplasmic reticulum, plasma membrane	50.0	49.53
PGSC0003DMT400045273	Potato	endoplasmic reticulum, extracellular, plasma membrane	49.52	49.52
Solyc06g060450.2.1	Tomato	endoplasmic reticulum, extracellular, plasma membrane	50.48	49.3
PGSC0003DMT400045270	Potato	endoplasmic reticulum, extracellular, plasma membrane	50.0	48.84
HORVU5Hr1G067730.1	Barley	cytosol, peroxisome	51.43	48.0
Solyc06g060440.1.1	Tomato	endoplasmic reticulum, extracellular, plasma membrane	48.57	47.89
Zm00001d005857_P001	Maize	cytosol, golgi	36.19	47.2
CDY00971	Canola	plasma membrane	45.71	45.71
CDY08577	Canola	plasma membrane	45.71	45.71
CDX73906	Canola	endoplasmic reticulum, extracellular, plasma membrane	45.24	45.67
CDX73903	Canola	endoplasmic reticulum, extracellular, plasma membrane	45.24	45.67
Bra017957.1-P	Field mustard	endoplasmic reticulum, golgi, vacuole	67.14	45.34
CDY00701	Canola	plasma membrane	44.29	44.71
Os08t0469400-00	Rice	endoplasmic reticulum, extracellular, vacuole	29.05	44.53
Solyc06g060430.1.1	Tomato	cytosol	18.57	42.39
HORVU7Hr1G035390.1	Barley	mitochondrion, plastid	55.24	42.34
CDY36275	Canola	endoplasmic reticulum, extracellular, plasma membrane	37.62	40.1
CDX96872	Canola	endoplasmic reticulum, extracellular, plasma membrane	39.05	38.5
KXG25366	Sorghum	plasma membrane	45.71	38.4
CDY62212	Canola	endoplasmic reticulum, extracellular, plasma membrane	38.57	38.03
CDY16181	Canola	endoplasmic reticulum, plasma membrane, vacuole	38.57	37.85
CDY16125	Canola	endoplasmic reticulum, extracellular, plasma membrane	38.1	37.74
CDX85047	Canola	endoplasmic reticulum	38.1	37.38
CDY33785	Canola	endoplasmic reticulum, extracellular, plasma membrane	37.62	37.26
CDY09334	Canola	endoplasmic reticulum, extracellular, vacuole	37.62	36.57
CDY03005	Canola	endoplasmic reticulum, extracellular, plasma membrane	36.19	35.51
CDY00102	Canola	cytosol	28.1	34.91
CDX95934	Canola	vacuole	35.71	34.88
CDY53680	Canola	endoplasmic reticulum, extracellular, vacuole	35.71	34.72
CDY61620	Canola	endoplasmic reticulum	35.24	34.58
CDY45170	Canola	endoplasmic reticulum, extracellular	35.24	34.58
CDY24142	Canola	endoplasmic reticulum, plasma membrane, vacuole	34.76	34.11
CDY40925	Canola	endoplasmic reticulum	34.76	33.95
GSMUA_Achr6P10010_001	Banana	nucleus, peroxisome, plasma membrane	50.48	33.33
CDX85243	Canola	mitochondrion	34.76	32.88
CDY19998	Canola	endoplasmic reticulum, extracellular	33.81	32.87
CDY44411	Canola	golgi, plasma membrane, plastid	34.29	32.43
CDY04053	Canola	endoplasmic reticulum	34.29	32.29

Protein Annotations

EnsemblPlants:CDY04681	EnsemblPlantsGene:GSBRNA2T00119293001	GO:A0A078ETY6	InterPro:GOLD_dom	InterPro:IPR009038	InterPro:TMP21-related
PANTHER:PTHR22811	PANTHER:PTHR22811:SF76	PFAM:PF01105	PFscan:PS50866	ProteinID:CDY04681	ProteinID:CDY04681.1
SignalP:SignalP-noTM	SMART:SM01190	TMHMM:TMhelix	UniParc:UPI0004EEAE52	MapMan:22.3.5.2	:

Description

BnaC05g17190D

Coordinates

chrLK031956:-:839621..841103

Molecular Weight (calculated)

23382.9 Da

IEP (calculated)

6.146

GRAVY (calculated)

-0.066

Length

210 amino acids

Sequence
(BLAST)

001: MSIRGGIVGF SPVLAAVLFL LTVNHGEAIW LTIPPTGGTK CVSEEIQSNV VVLADYYVVD EHSPENTPAI SSKVTSPYGN NLHHQDNVTH GQFAFTTQET
101: GNYLACFWVD STHHPQANPL TLGIDWKIGI AAKDWDSGVE LQLRRLDGLV QSIRENINYI KDREAEMREV SETTNSRVAW FSIMSLGVCL CVAGSQILYL
201: KRYFEKKKLI

Best Arabidopsis Sequence Match ( AT1G21900.1 )
(BLAST)

001: MAINRIAHGS LFLTVVLFFL TVNYGEAIWL TIPTTGGTKC VSEEIQSNVV VLADYYVVDE HNPENTPAVS SKVTSPYGNN LHHQENVTHG QFAFTTQEAG
101: NYLACFWIDS SHHLANPITL GVDWKMGIAA KDWDSVAKKE KIEGVELQLR RLEGLVLSIR ENLNYIKDRE AEMREVSETT NSRVAWFSIM SLGVCVVVVG
201: SQILYLKRYF HKKKLI

Arabidopsis Description

Transmembrane emp24 domain-containing protein p24delta5 [Source:UniProtKB/Swiss-Prot;Acc:Q8RWM6]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.