Skip to main content
crop-pal logo
Potato
Search for another protein from :
Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, extracellular, plasma membrane

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 6
  • vacuole 5
  • plasma membrane 6
  • golgi 5
  • plastid 1
  • nucleus 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, extracellular, plasma membrane
Any Predictor:nucleus, plastid, secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Plant-mPloc:nucleus, plastid
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc11g013000.1.1 Tomato plastid 98.1 98.1
KRH53215 Soybean endoplasmic reticulum 65.24 64.62
TraesCS7A01G169500.1 Wheat cytosol, endoplasmic reticulum, plasma membrane 58.57 63.4
TraesCS7D01G170400.1 Wheat cytosol, endoplasmic reticulum, plasma membrane 58.1 62.89
PGSC0003DMT400061146 Potato extracellular 62.86 62.86
KRH16308 Soybean endoplasmic reticulum 63.81 62.33
KRH64707 Soybean plasma membrane 63.81 62.33
KRH18772 Soybean plasma membrane 63.33 61.86
GSMUA_Achr6P02320_001 Banana endoplasmic reticulum, plasma membrane 63.33 61.57
PGSC0003DMT400045270 Potato endoplasmic reticulum, extracellular, plasma membrane 62.38 60.93
AT1G21900.1 Thale cress plasma membrane 61.9 60.19
GSMUA_AchrUn_... Banana endoplasmic reticulum, extracellular, plasma membrane 61.9 60.19
PGSC0003DMT400045273 Potato endoplasmic reticulum, extracellular, plasma membrane 59.52 59.52
EES07590 Sorghum endoplasmic reticulum, extracellular, vacuole 58.57 59.42
CDY04681 Canola endoplasmic reticulum 59.05 59.05
Os06t0210100-01 Rice plastid 58.57 58.85
EER88046 Sorghum endoplasmic reticulum 59.05 57.94
TraesCS6B01G361000.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 58.1 57.82
Zm00001d037163_P002 Maize extracellular, plasma membrane 58.1 57.82
TraesCS6D01G309100.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 57.62 57.35
TraesCS6A01G330200.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 57.62 57.35
VIT_18s0001g03200.t01 Wine grape endoplasmic reticulum 55.24 57.14
PGSC0003DMT400045277 Potato extracellular 58.1 57.01
Zm00001d018194_P001 Maize extracellular 45.24 56.55
Zm00001d005857_P001 Maize cytosol, golgi 43.33 56.52
TraesCS7B01G074300.1 Wheat plasma membrane 58.1 56.48
GSMUA_Achr3P20310_001 Banana plasma membrane 57.14 55.56
EER96837 Sorghum extracellular 54.76 55.29
GSMUA_Achr10P... Banana endoplasmic reticulum, plasma membrane, vacuole 57.62 55.25
Os02t0768200-01 Rice endoplasmic reticulum, plasma membrane, vacuole 57.14 55.05
CDX96570 Canola endoplasmic reticulum, extracellular, plasma membrane 60.95 54.94
Os09t0453200-00 Rice endoplasmic reticulum, plasma membrane 54.76 54.25
CDY38827 Canola endoplasmic reticulum, extracellular, vacuole 60.48 53.36
TraesCS5B01G233900.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 52.38 52.63
Bra016401.1-P Field mustard endoplasmic reticulum, extracellular, plasma membrane 60.48 52.48
TraesCS5A01G235500.1 Wheat extracellular, vacuole 51.9 51.9
TraesCS5D01G242600.1 Wheat endoplasmic reticulum 51.9 51.9
HORVU5Hr1G067730.1 Barley cytosol, peroxisome 52.86 49.33
CDY08168 Canola endoplasmic reticulum 36.67 46.67
Os08t0469400-00 Rice endoplasmic reticulum, extracellular, vacuole 29.52 45.26
HORVU7Hr1G035390.1 Barley mitochondrion, plastid 58.1 44.53
KXG25366 Sorghum plasma membrane 51.43 43.2
PGSC0003DMT400073002 Potato extracellular 40.0 39.44
PGSC0003DMT400007416 Potato endoplasmic reticulum, extracellular, vacuole 39.05 38.32
PGSC0003DMT400062438 Potato mitochondrion 39.05 37.96
GSMUA_Achr6P10010_001 Banana nucleus, peroxisome, plasma membrane 55.71 36.79
Bra017957.1-P Field mustard endoplasmic reticulum, golgi, vacuole 40.95 27.65
Protein Annotations
EnsemblPlants:PGSC0003DMT400002378EnsemblPlantsGene:PGSC0003DMG400000912EntrezGene:102591360GO:GO:0005575GO:GO:0016020GO:GO:0016021
InterPro:GOLD_domInterPro:IPR009038InterPro:TMP21-relatedPANTHER:PTHR22811PANTHER:PTHR22811:SF76PFAM:PF01105
PFscan:PS50866PGSC:PGSC0003DMG400000912RefSeq:XP_006351894.1SEG:segSignalP:SignalP-noTMSMART:SM01190
TMHMM:TMhelixUniParc:UPI0002957750UniProt:M0ZK15MapMan:22.3.5.2::
Description
Transmembrane emp24 domain-containing protein 10 [Source:PGSC_GENE;Acc:PGSC0003DMG400000912]
Coordinates
chr11:+:10827709..10832396
Molecular Weight (calculated)
23461.5 Da
IEP (calculated)
5.889
GRAVY (calculated)
0.065
Length
210 amino acids
Sequence
(BLAST)
001: MELCKLVLLL LTVMTVAEAI WMELPTSGTK CLSEDIHTNV VVLADYSVIG DEEHAQANVV PTISVKVTSP FGNNLHHKEN VTHGQFAFTT TEAGNYLACF
101: WMDNHAPGAK AVTIGIDWKT GISAKDWESV ARKDKIEGVE LELVKLEGIV QAIHENLEYL KDREAVMREE NEKTNSRVAW LSIMSLGICI AAAVLQVFYL
201: KNFFRKKKLI
Best Arabidopsis Sequence Match ( AT1G09580.1 )
(BLAST)
001: MKMTAKMRRE FPTAFLLLFL VPVMIPVGEA VWLDVPPTGT KCVSEEIQSN VVVLADYLII SEDHEVMPTI SVKVTSPYGN NLHNMENVTH GQFAFTTQES
101: GNYLACFWAD EKSHGNKNVS INIDWRTGIA AKDWASIAKK EKIEGVELEI RKLEGAVEAI HENILYLRNR EADMRTMSEK TNSRVAWYSI MSLGVCIAVS
201: GFQVLYLKQY FEKKKLI
Arabidopsis Description
Transmembrane emp24 domain-containing protein p24delta3 [Source:UniProtKB/Swiss-Prot;Acc:Q6IDL4]
SUBAcon: [endoplasmic reticulum,golgi,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.