CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
mitochondrion 1
cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX93246	Canola	plastid	96.34	96.34
Bra017058.1-P	Field mustard	plastid	64.63	58.89
AT2G39705.1	Thale cress	plastid	60.98	57.47
GSMUA_Achr6P34070_001	Banana	cytosol	40.24	56.9
TraesCS1B01G292500.1	Wheat	nucleus, plastid	36.59	50.0
KXG33681	Sorghum	cytosol	40.24	49.25
CDX74841	Canola	plastid	57.32	48.96
CDY20471	Canola	plastid	57.32	48.96
CDY69313	Canola	plastid	57.32	48.96
GSMUA_Achr7P10600_001	Banana	nucleus	48.78	48.78
Os12t0573600-01	Rice	nucleus	36.59	48.39
TraesCS3A01G361200.1	Wheat	cytosol, mitochondrion, nucleus	41.46	46.58
GSMUA_Achr10P...	Banana	nucleus	42.68	45.45
TraesCS3B01G393600.1	Wheat	nucleus	39.02	45.07
TraesCS1A01G283300.1	Wheat	mitochondrion, nucleus	32.93	45.0
GSMUA_Achr6P15210_001	Banana	cytosol, plastid	46.34	44.71
GSMUA_Achr9P28300_001	Banana	nucleus	36.59	43.48
Os01t0844200-01	Rice	mitochondrion	40.24	43.42
GSMUA_Achr2P16410_001	Banana	nucleus	41.46	43.04
GSMUA_Achr9P03880_001	Banana	nucleus	45.12	43.02
HORVU1Hr1G072580.1	Barley	nucleus, plastid	37.8	42.47
Zm00001d012414_P001	Maize	cytosol	37.8	41.89
CDY02946	Canola	nucleus, plastid	43.9	40.91
Zm00001d042900_P001	Maize	plastid	37.8	40.79
CDY41215	Canola	nucleus	41.46	40.0
CDY40235	Canola	nucleus	41.46	38.64
CDX76087	Canola	nucleus	41.46	38.64
KXG23778	Sorghum	plastid	39.02	38.55
Zm00001d030750_P001	Maize	nucleus, plastid	34.15	38.36
KXG23779	Sorghum	nucleus	32.93	37.5
Zm00001d041535_P001	Maize	plastid	30.49	37.31
Zm00001d028598_P001	Maize	cytosol	43.9	36.36
TraesCS5D01G091800.1	Wheat	plastid	32.93	35.53
Zm00001d047820_P001	Maize	cytosol, mitochondrion, nucleus	42.68	35.35
TraesCS4D01G209000.1	Wheat	cytosol	41.46	34.34
TraesCS4B01G208100.1	Wheat	cytosol, plastid	41.46	34.34
TraesCS4A01G096300.1	Wheat	cytosol	41.46	34.34
TraesCS5B01G085600.1	Wheat	plastid	31.71	34.21
HORVU5Hr1G020880.1	Barley	plastid	31.71	34.21
TraesCS5A01G080800.1	Wheat	plastid	31.71	33.77
Os03t0272900-02	Rice	cytosol	40.24	33.67
HORVU4Hr1G059950.1	Barley	cytosol	41.46	33.33
OQU92832	Sorghum	cytosol, mitochondrion, plastid	42.68	33.02
Os05t0458200-01	Rice	nucleus	34.15	32.18
HORVU3Hr1G086090.1	Barley	cytosol, plastid	39.02	29.91
GSMUA_Achr11P...	Banana	cytosol	37.8	24.8
GSMUA_Achr5P28710_001	Banana	plastid	39.02	23.7

Protein Annotations

EnsemblPlants:CDY07025	EnsemblPlantsGene:GSBRNA2T00123339001	InterPro:DVL	PANTHER:PTHR33102	PANTHER:PTHR33102:SF9	PFAM:PF08137
ProteinID:CDY07025	ProteinID:CDY07025.1	UniParc:UPI0004EDDD1B	MapMan:11.10.1.6.1	:	:

Description

BnaA04g22900D

Coordinates

chrLK031974:+:725608..725880

Molecular Weight (calculated)

9413.5 Da

IEP (calculated)

11.192

GRAVY (calculated)

-0.613

Length

82 amino acids

Sequence
(BLAST)

1: MASSGLTRSG SAPQFEKWKL SKKDGFSGGT LKITRSSSTQ KHGRCAFTRK CARLVKEQRA RFYIMRRCVI MLICWRDNYS DS

Best Arabidopsis Sequence Match ( AT2G39705.1 )
(BLAST)

1: MASSSSLTRS GSVHLDEKWK LSKKDGGASR ITRSSSTSSS SFNGKKQGRC AFTRKCARLV KEQRARFYIM RRCVIMLICW RDNYSDS

Arabidopsis Description

RTFL8RTFL8 [Source:UniProtKB/TrEMBL;Acc:A0A178VQG8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.