Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4B01G208100.1 | Wheat | cytosol, plastid | 94.95 | 94.95 |
| TraesCS4A01G096300.1 | Wheat | cytosol | 87.88 | 87.88 |
| HORVU4Hr1G059950.1 | Barley | cytosol | 85.86 | 83.33 |
| Os03t0272900-02 | Rice | cytosol | 73.74 | 74.49 |
| Zm00001d047820_P001 | Maize | cytosol, mitochondrion, nucleus | 70.71 | 70.71 |
| Zm00001d028598_P001 | Maize | cytosol | 69.7 | 69.7 |
| OQU92832 | Sorghum | cytosol, mitochondrion, plastid | 73.74 | 68.87 |
| GSMUA_Achr6P34070_001 | Banana | cytosol | 36.36 | 62.07 |
| GSMUA_Achr10P... | Banana | nucleus | 41.41 | 53.25 |
| GSMUA_Achr9P28300_001 | Banana | nucleus | 36.36 | 52.17 |
| GSMUA_Achr2P16410_001 | Banana | nucleus | 38.38 | 48.1 |
| KRH15084 | Soybean | plastid | 38.38 | 46.91 |
| KRH73051 | Soybean | plastid | 39.39 | 46.43 |
| PGSC0003DMT400016270 | Potato | nucleus, plastid | 31.31 | 43.66 |
| TraesCS5D01G091800.1 | Wheat | plastid | 33.33 | 43.42 |
| CDX93246 | Canola | plastid | 35.35 | 42.68 |
| VIT_13s0019g01890.t01 | Wine grape | plastid | 35.35 | 42.17 |
| CDY07025 | Canola | plastid | 34.34 | 41.46 |
| Bra017058.1-P | Field mustard | plastid | 37.37 | 41.11 |
| AT2G39705.1 | Thale cress | plastid | 34.34 | 39.08 |
| AT3G55515.1 | Thale cress | nucleus | 29.29 | 36.71 |
| KRG93907 | Soybean | mitochondrion | 26.26 | 35.14 |
| Bra005022.1-P | Field mustard | plastid | 33.33 | 34.38 |
| CDY69313 | Canola | plastid | 33.33 | 34.38 |
| CDX74841 | Canola | plastid | 33.33 | 34.38 |
| CDY20471 | Canola | plastid | 33.33 | 34.38 |
| CDY41215 | Canola | nucleus | 28.28 | 32.94 |
| CDY40235 | Canola | nucleus | 28.28 | 31.82 |
| Bra007172.1-P | Field mustard | nucleus | 28.28 | 31.82 |
| CDY02946 | Canola | nucleus, plastid | 26.26 | 29.55 |
| Bra014737.1-P | Field mustard | nucleus | 25.25 | 28.41 |
| CDX76087 | Canola | nucleus | 25.25 | 28.41 |
| KRH30989 | Soybean | plastid | 30.3 | 27.52 |
| KRG97895 | Soybean | cytosol, plastid | 30.3 | 27.27 |
Protein Annotations
| EnsemblPlants:TraesCS4D01G209000.1 | EnsemblPlantsGene:TraesCS4D01G209000 | InterPro:DVL | PANTHER:PTHR33102 | PANTHER:PTHR33102:SF3 | PFAM:PF08137 |
| SEG:seg | MapMan:11.10.1.6.1 | : | : | : | : |
Description
No Description!
Coordinates
chr4D:+:360467730..360468029
Molecular Weight (calculated)
10786.8 Da
IEP (calculated)
10.537
GRAVY (calculated)
-0.553
Length
99 amino acids
Sequence
(BLAST)
(BLAST)
1: MEFYDDEKWK FSKKSRNNGS CRRVSSGGGG GGDPFLKRSA STRDQAIGRR ASATAAASAS GCAAPSFSSR CAGLVKEQRA RFYIMRRCVT MLVCWKDCS
001: MAEFKSKLNK GHAFTSKCAS LVKEQRARLY ILRRCATMLC CWYIQGDDSP LAAWQNPFTR NLTLSSDIFW CKTLLQAYKT ERERTRDLSA KRAGVFTVSE
101: TETVEMLIL
101: TETVEMLIL
Arabidopsis Description
RTFL9ROTUNDIFOLIA like 9 [Source:UniProtKB/TrEMBL;Acc:F4HTB2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.