Factsheet for Bra017058.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
extracellular 1
mitochondrion 1
cytosol 2
nucleus 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra005022.1-P	Field mustard	plastid	70.0	65.62
CDY07025	Canola	plastid	58.89	64.63
CDX93246	Canola	plastid	57.78	63.41
AT2G39705.1	Thale cress	plastid	60.0	62.07
GSMUA_Achr6P34070_001	Banana	cytosol	36.67	56.9
TraesCS1B01G292500.1	Wheat	nucleus, plastid	33.33	50.0
TraesCS3B01G393600.1	Wheat	nucleus	37.78	47.89
Os12t0573600-01	Rice	nucleus	32.22	46.77
TraesCS3A01G361200.1	Wheat	cytosol, mitochondrion, nucleus	37.78	46.58
Bra014737.1-P	Field mustard	nucleus	44.44	45.45
TraesCS1A01G283300.1	Wheat	mitochondrion, nucleus	30.0	45.0
KXG33681	Sorghum	cytosol	33.33	44.78
GSMUA_Achr10P...	Banana	nucleus	37.78	44.16
GSMUA_Achr7P10600_001	Banana	nucleus	40.0	43.9
GSMUA_Achr9P28300_001	Banana	nucleus	33.33	43.48
GSMUA_Achr2P16410_001	Banana	nucleus	37.78	43.04
GSMUA_Achr9P03880_001	Banana	nucleus	41.11	43.02
Zm00001d012414_P001	Maize	cytosol	34.44	41.89
KXG23779	Sorghum	nucleus	33.33	41.67
GSMUA_Achr6P15210_001	Banana	cytosol, plastid	38.89	41.18
HORVU1Hr1G072580.1	Barley	nucleus, plastid	33.33	41.1
Zm00001d042900_P001	Maize	plastid	34.44	40.79
Os01t0844200-01	Rice	mitochondrion	34.44	40.79
Zm00001d030750_P001	Maize	nucleus, plastid	32.22	39.73
Bra007172.1-P	Field mustard	nucleus	37.78	38.64
TraesCS4B01G208100.1	Wheat	cytosol, plastid	41.11	37.37
TraesCS4D01G209000.1	Wheat	cytosol	41.11	37.37
KXG23778	Sorghum	plastid	34.44	37.35
Zm00001d041535_P001	Maize	plastid	27.78	37.31
TraesCS4A01G096300.1	Wheat	cytosol	40.0	36.36
Os03t0272900-02	Rice	cytosol	38.89	35.71
Os05t0458200-01	Rice	nucleus	34.44	35.63
TraesCS5A01G080800.1	Wheat	plastid	30.0	35.06
Zm00001d028598_P001	Maize	cytosol	37.78	34.34
TraesCS5B01G085600.1	Wheat	plastid	28.89	34.21
TraesCS5D01G091800.1	Wheat	plastid	28.89	34.21
Zm00001d047820_P001	Maize	cytosol, mitochondrion, nucleus	36.67	33.33
HORVU4Hr1G059950.1	Barley	cytosol	37.78	33.33
HORVU5Hr1G020880.1	Barley	plastid	27.78	32.89
OQU92832	Sorghum	cytosol, mitochondrion, plastid	37.78	32.08
HORVU3Hr1G086090.1	Barley	cytosol, plastid	32.22	27.1
GSMUA_Achr11P...	Banana	cytosol	36.67	26.4
GSMUA_Achr5P28710_001	Banana	plastid	33.33	22.22

Protein Annotations

EnsemblPlants:Bra017058.1	EnsemblPlants:Bra017058.1-P	EnsemblPlantsGene:Bra017058	InterPro:DVL	PANTHER:PTHR33102	PANTHER:PTHR33102:SF9
PFAM:PF08137	UniParc:UPI0002544D60	UniProt:M4DKM7	MapMan:11.10.1.6.1	:	:

Description

AT2G39705 (E=1e-031) RTFL8, DVL11 | RTFL8 (ROTUNDIFOLIA LIKE 8)

Coordinates

chrA04:+:16867747..16868019

Molecular Weight (calculated)

10116.3 Da

IEP (calculated)

11.069

GRAVY (calculated)

-0.566

Length

90 amino acids

Sequence
(BLAST)

1: MASSGLTRSG SAPQFEKWKL SKKDGFSGGT LKITRSSSVS SCGGNKAQKH GRCAFTRKCA RLVKEQRARF YIMRRCVIML ICWRDNYSDS

Best Arabidopsis Sequence Match ( AT2G39705.1 )
(BLAST)

1: MASSSSLTRS GSVHLDEKWK LSKKDGGASR ITRSSSTSSS SFNGKKQGRC AFTRKCARLV KEQRARFYIM RRCVIMLICW RDNYSDS

Arabidopsis Description

RTFL8RTFL8 [Source:UniProtKB/TrEMBL;Acc:A0A178VQG8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.