Factsheet for Bra007172.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 2
cytosol 2
nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY40235	Canola	nucleus	100.0	100.0
CDY41215	Canola	nucleus	94.32	97.65
Bra014737.1-P	Field mustard	nucleus	52.27	52.27
AT3G55515.1	Thale cress	nucleus	44.32	49.37
TraesCS1A01G283300.1	Wheat	mitochondrion, nucleus	29.55	43.33
TraesCS1B01G292500.1	Wheat	nucleus, plastid	28.41	41.67
GSMUA_Achr6P34070_001	Banana	cytosol	27.27	41.38
Bra017058.1-P	Field mustard	plastid	38.64	37.78
GSMUA_Achr9P28300_001	Banana	nucleus	29.55	37.68
VIT_13s0019g01890.t01	Wine grape	plastid	35.23	37.35
KXG33681	Sorghum	cytosol	28.41	37.31
Os12t0573600-01	Rice	nucleus	26.14	37.1
HORVU1Hr1G072580.1	Barley	nucleus, plastid	30.68	36.99
TraesCS3B01G393600.1	Wheat	nucleus	29.55	36.62
Bra005022.1-P	Field mustard	plastid	39.77	36.46
KRG93907	Soybean	mitochondrion	29.55	35.14
GSMUA_Achr9P03880_001	Banana	nucleus	34.09	34.88
TraesCS3A01G361200.1	Wheat	cytosol, mitochondrion, nucleus	28.41	34.25
GSMUA_Achr2P16410_001	Banana	nucleus	30.68	34.18
GSMUA_Achr7P10600_001	Banana	nucleus	31.82	34.15
GSMUA_Achr6P15210_001	Banana	cytosol, plastid	31.82	32.94
Os01t0844200-01	Rice	mitochondrion	28.41	32.89
GSMUA_Achr10P...	Banana	nucleus	28.41	32.47
Zm00001d012414_P001	Maize	cytosol	27.27	32.43
PGSC0003DMT400016270	Potato	nucleus, plastid	26.14	32.39
KRG97895	Soybean	cytosol, plastid	38.64	30.91
Zm00001d028598_P001	Maize	cytosol	32.95	29.29
HORVU3Hr1G086090.1	Barley	cytosol, plastid	35.23	28.97
Zm00001d042900_P001	Maize	plastid	25.0	28.95
KXG23778	Sorghum	plastid	27.27	28.92
OQU92832	Sorghum	cytosol, mitochondrion, plastid	34.09	28.3
TraesCS4A01G096300.1	Wheat	cytosol	31.82	28.28
TraesCS4B01G208100.1	Wheat	cytosol, plastid	31.82	28.28
TraesCS4D01G209000.1	Wheat	cytosol	31.82	28.28
KXG23779	Sorghum	nucleus	22.73	27.78
Os05t0458200-01	Rice	nucleus	27.27	27.59
Os03t0272900-02	Rice	cytosol	30.68	27.55
KRH30989	Soybean	plastid	34.09	27.52
HORVU4Hr1G059950.1	Barley	cytosol	31.82	27.45
Zm00001d030750_P001	Maize	nucleus, plastid	22.73	27.4
Zm00001d047820_P001	Maize	cytosol, mitochondrion, nucleus	30.68	27.27
Zm00001d041535_P001	Maize	plastid	20.45	26.87
TraesCS5D01G091800.1	Wheat	plastid	21.59	25.0
TraesCS5B01G085600.1	Wheat	plastid	21.59	25.0
HORVU5Hr1G020880.1	Barley	plastid	21.59	25.0
TraesCS5A01G080800.1	Wheat	plastid	21.59	24.68
GSMUA_Achr5P28710_001	Banana	plastid	31.82	20.74
GSMUA_Achr11P...	Banana	cytosol	27.27	19.2

Protein Annotations

EnsemblPlants:Bra007172.1	EnsemblPlants:Bra007172.1-P	EnsemblPlantsGene:Bra007172	InterPro:DVL	PANTHER:PTHR33102	PANTHER:PTHR33102:SF9
PFAM:PF08137	UniParc:UPI0002542A94	UniProt:M4CSI0	MapMan:11.10.1.6.1	:	:

Description

AT3G55515 (E=2e-019) DVL8, RTFL7 | RTFL7 (ROTUNDIFOLIA LIKE 7)

Coordinates

chrA09:+:27720881..27721147

Molecular Weight (calculated)

10304.3 Da

IEP (calculated)

11.252

GRAVY (calculated)

-0.912

Length

88 amino acids

Sequence
(BLAST)

1: MTRSSANSPR FQLNERWKPS STKEIFGDDG GPSRVTSSLR QKKQRKHGFT RKCGRLVREQ RARFYIIGRC VIMLLCWTDN SNSHCHDF

Best Arabidopsis Sequence Match ( AT3G55515.1 )
(BLAST)

1: MSRLRNSAQL QLSKKESLGD NGGALNTTRS SRQKQGKYGF TRKCGRLVKE QRARFYIMRR CVVMLICWTD HNNNNSDHS

Arabidopsis Description

DVL8DVL8 [Source:UniProtKB/TrEMBL;Acc:Q6IM93]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.