Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra007172.1-P | Field mustard | nucleus | 97.65 | 94.32 |
| CDY40235 | Canola | nucleus | 97.65 | 94.32 |
| CDY02946 | Canola | nucleus, plastid | 56.47 | 54.55 |
| CDX76087 | Canola | nucleus | 54.12 | 52.27 |
| AT3G55515.1 | Thale cress | nucleus | 44.71 | 48.1 |
| TraesCS1A01G283300.1 | Wheat | mitochondrion, nucleus | 30.59 | 43.33 |
| TraesCS1B01G292500.1 | Wheat | nucleus, plastid | 29.41 | 41.67 |
| CDY07025 | Canola | plastid | 40.0 | 41.46 |
| GSMUA_Achr6P34070_001 | Banana | cytosol | 28.24 | 41.38 |
| CDX93246 | Canola | plastid | 38.82 | 40.24 |
| GSMUA_Achr9P28300_001 | Banana | nucleus | 30.59 | 37.68 |
| CDX74841 | Canola | plastid | 42.35 | 37.5 |
| CDY20471 | Canola | plastid | 42.35 | 37.5 |
| CDY69313 | Canola | plastid | 42.35 | 37.5 |
| VIT_13s0019g01890.t01 | Wine grape | plastid | 36.47 | 37.35 |
| KXG33681 | Sorghum | cytosol | 29.41 | 37.31 |
| Os12t0573600-01 | Rice | nucleus | 27.06 | 37.1 |
| HORVU1Hr1G072580.1 | Barley | nucleus, plastid | 31.76 | 36.99 |
| TraesCS3B01G393600.1 | Wheat | nucleus | 30.59 | 36.62 |
| KRG93907 | Soybean | mitochondrion | 30.59 | 35.14 |
| GSMUA_Achr9P03880_001 | Banana | nucleus | 35.29 | 34.88 |
| TraesCS3A01G361200.1 | Wheat | cytosol, mitochondrion, nucleus | 29.41 | 34.25 |
| GSMUA_Achr2P16410_001 | Banana | nucleus | 31.76 | 34.18 |
| GSMUA_Achr7P10600_001 | Banana | nucleus | 32.94 | 34.15 |
| GSMUA_Achr6P15210_001 | Banana | cytosol, plastid | 32.94 | 32.94 |
| Os01t0844200-01 | Rice | mitochondrion | 29.41 | 32.89 |
| GSMUA_Achr10P... | Banana | nucleus | 29.41 | 32.47 |
| Zm00001d012414_P001 | Maize | cytosol | 28.24 | 32.43 |
| PGSC0003DMT400016270 | Potato | nucleus, plastid | 27.06 | 32.39 |
| KRG97895 | Soybean | cytosol, plastid | 40.0 | 30.91 |
| Zm00001d028598_P001 | Maize | cytosol | 34.12 | 29.29 |
| HORVU3Hr1G086090.1 | Barley | cytosol, plastid | 36.47 | 28.97 |
| Zm00001d042900_P001 | Maize | plastid | 25.88 | 28.95 |
| KXG23778 | Sorghum | plastid | 28.24 | 28.92 |
| OQU92832 | Sorghum | cytosol, mitochondrion, plastid | 35.29 | 28.3 |
| TraesCS4A01G096300.1 | Wheat | cytosol | 32.94 | 28.28 |
| TraesCS4B01G208100.1 | Wheat | cytosol, plastid | 32.94 | 28.28 |
| TraesCS4D01G209000.1 | Wheat | cytosol | 32.94 | 28.28 |
| KXG23779 | Sorghum | nucleus | 23.53 | 27.78 |
| Os05t0458200-01 | Rice | nucleus | 28.24 | 27.59 |
| Os03t0272900-02 | Rice | cytosol | 31.76 | 27.55 |
| KRH30989 | Soybean | plastid | 35.29 | 27.52 |
| HORVU4Hr1G059950.1 | Barley | cytosol | 32.94 | 27.45 |
| Zm00001d030750_P001 | Maize | nucleus, plastid | 23.53 | 27.4 |
| Zm00001d047820_P001 | Maize | cytosol, mitochondrion, nucleus | 31.76 | 27.27 |
| Zm00001d041535_P001 | Maize | plastid | 21.18 | 26.87 |
| HORVU5Hr1G020880.1 | Barley | plastid | 22.35 | 25.0 |
| TraesCS5D01G091800.1 | Wheat | plastid | 22.35 | 25.0 |
| TraesCS5B01G085600.1 | Wheat | plastid | 22.35 | 25.0 |
| TraesCS5A01G080800.1 | Wheat | plastid | 22.35 | 24.68 |
| GSMUA_Achr5P28710_001 | Banana | plastid | 32.94 | 20.74 |
| GSMUA_Achr11P... | Banana | cytosol | 28.24 | 19.2 |
Protein Annotations
| EnsemblPlants:CDY41215 | EnsemblPlantsGene:GSBRNA2T00072631001 | InterPro:DVL | PANTHER:PTHR33102 | PANTHER:PTHR33102:SF9 | PFAM:PF08137 |
| ProteinID:CDY41215 | ProteinID:CDY41215.1 | UniParc:UPI0004EDCDF4 | UniProt:A0A078HRJ4 | MapMan:11.10.1.6.1 | : |
Description
BnaC08g26430DBnaC08g26430D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HRJ4]
Coordinates
chrLK032493:-:123009..123266
Molecular Weight (calculated)
9893.9 Da
IEP (calculated)
11.712
GRAVY (calculated)
-0.940
Length
85 amino acids
Sequence
(BLAST)
(BLAST)
1: MTRSSANSPR FQLNERWKPS STKEIFGDDG GPSRVTSSLR QKKQRKHGFT RKCGRLVREQ RARFYIIGRC VIMLLCWTDN SNSQT
1: MSRLRNSAQL QLSKKESLGD NGGALNTTRS SRQKQGKYGF TRKCGRLVKE QRARFYIMRR CVVMLICWTD HNNNNSDHS
Arabidopsis Description
DVL8DVL8 [Source:UniProtKB/TrEMBL;Acc:Q6IM93]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.