Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 3
- nucleus 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1B01G292500.1 | Wheat | nucleus, plastid | 61.67 | 61.67 |
| GSMUA_Achr6P34070_001 | Banana | cytosol | 50.0 | 51.72 |
| HORVU1Hr1G072580.1 | Barley | nucleus, plastid | 58.33 | 47.95 |
| TraesCS3A01G361200.1 | Wheat | cytosol, mitochondrion, nucleus | 55.0 | 45.21 |
| GSMUA_Achr9P28300_001 | Banana | nucleus | 45.0 | 39.13 |
| GSMUA_Achr10P... | Banana | nucleus | 48.33 | 37.66 |
| Os05t0458200-01 | Rice | nucleus | 51.67 | 35.63 |
| GSMUA_Achr2P16410_001 | Banana | nucleus | 45.0 | 34.18 |
| PGSC0003DMT400016270 | Potato | nucleus, plastid | 40.0 | 33.8 |
| CDY07025 | Canola | plastid | 45.0 | 32.93 |
| VIT_13s0019g01890.t01 | Wine grape | plastid | 45.0 | 32.53 |
| TraesCS5A01G080800.1 | Wheat | plastid | 41.67 | 32.47 |
| KRG93907 | Soybean | mitochondrion | 40.0 | 32.43 |
| AT2G39705.1 | Thale cress | plastid | 46.67 | 32.18 |
| KRH15084 | Soybean | plastid | 43.33 | 32.1 |
| CDX93246 | Canola | plastid | 43.33 | 31.71 |
| CDY41215 | Canola | nucleus | 43.33 | 30.59 |
| AT3G55515.1 | Thale cress | nucleus | 40.0 | 30.38 |
| Bra017058.1-P | Field mustard | plastid | 45.0 | 30.0 |
| KRH73051 | Soybean | plastid | 41.67 | 29.76 |
| CDY40235 | Canola | nucleus | 43.33 | 29.55 |
| Bra007172.1-P | Field mustard | nucleus | 43.33 | 29.55 |
| TraesCS4A01G096300.1 | Wheat | cytosol | 48.33 | 29.29 |
| CDY02946 | Canola | nucleus, plastid | 41.67 | 28.41 |
| Bra014737.1-P | Field mustard | nucleus | 40.0 | 27.27 |
| CDX76087 | Canola | nucleus | 40.0 | 27.27 |
| CDX74841 | Canola | plastid | 43.33 | 27.08 |
| CDY69313 | Canola | plastid | 43.33 | 27.08 |
| CDY20471 | Canola | plastid | 43.33 | 27.08 |
| Bra005022.1-P | Field mustard | plastid | 41.67 | 26.04 |
| KRG97895 | Soybean | cytosol, plastid | 43.33 | 23.64 |
| KRH30989 | Soybean | plastid | 40.0 | 22.02 |
Protein Annotations
| EnsemblPlants:TraesCS1A01G283300.1 | EnsemblPlantsGene:TraesCS1A01G283300 | InterPro:DVL | PANTHER:PTHR33102 | PANTHER:PTHR33102:SF3 | PFAM:PF08137 |
| MapMan:11.10.1.6.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chr1A:-:480931446..480931628
Molecular Weight (calculated)
6935.6 Da
IEP (calculated)
12.066
GRAVY (calculated)
-0.663
Length
60 amino acids
Sequence
(BLAST)
(BLAST)
1: MDKCGLSKKR GWKGAMATRR SGGGPSSFPR RCARLVREQR ARFYIARRCV AMLACWRHYS
1: MSRLRNSAQL QLSKKESLGD NGGALNTTRS SRQKQGKYGF TRKCGRLVKE QRARFYIMRR CVVMLICWTD HNNNNSDHS
Arabidopsis Description
DVL8DVL8 [Source:UniProtKB/TrEMBL;Acc:Q6IM93]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.