CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
mitochondrion 1
cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY07025	Canola	plastid	96.34	96.34
Bra017058.1-P	Field mustard	plastid	63.41	57.78
GSMUA_Achr6P34070_001	Banana	cytosol	40.24	56.9
AT2G39705.1	Thale cress	plastid	59.76	56.32
GSMUA_Achr7P10600_001	Banana	nucleus	48.78	48.78
Os12t0573600-01	Rice	nucleus	36.59	48.39
TraesCS1B01G292500.1	Wheat	nucleus, plastid	35.37	48.33
CDX74841	Canola	plastid	56.1	47.92
CDY20471	Canola	plastid	56.1	47.92
CDY69313	Canola	plastid	56.1	47.92
KXG33681	Sorghum	cytosol	39.02	47.76
GSMUA_Achr10P...	Banana	nucleus	42.68	45.45
TraesCS3A01G361200.1	Wheat	cytosol, mitochondrion, nucleus	40.24	45.21
GSMUA_Achr9P28300_001	Banana	nucleus	37.8	44.93
GSMUA_Achr6P15210_001	Banana	cytosol, plastid	46.34	44.71
TraesCS3B01G393600.1	Wheat	nucleus	37.8	43.66
TraesCS1A01G283300.1	Wheat	mitochondrion, nucleus	31.71	43.33
GSMUA_Achr9P03880_001	Banana	nucleus	45.12	43.02
Os01t0844200-01	Rice	mitochondrion	39.02	42.11
HORVU1Hr1G072580.1	Barley	nucleus, plastid	36.59	41.1
Zm00001d012414_P001	Maize	cytosol	36.59	40.54
GSMUA_Achr2P16410_001	Banana	nucleus	39.02	40.51
CDY02946	Canola	nucleus, plastid	42.68	39.77
Zm00001d030750_P001	Maize	nucleus, plastid	35.37	39.73
Zm00001d042900_P001	Maize	plastid	36.59	39.47
CDY41215	Canola	nucleus	40.24	38.82
KXG23778	Sorghum	plastid	39.02	38.55
CDX76087	Canola	nucleus	40.24	37.5
KXG23779	Sorghum	nucleus	32.93	37.5
CDY40235	Canola	nucleus	40.24	37.5
Zm00001d028598_P001	Maize	cytosol	45.12	37.37
Zm00001d047820_P001	Maize	cytosol, mitochondrion, nucleus	43.9	36.36
Zm00001d041535_P001	Maize	plastid	29.27	35.82
TraesCS5D01G091800.1	Wheat	plastid	32.93	35.53
TraesCS4D01G209000.1	Wheat	cytosol	42.68	35.35
TraesCS4B01G208100.1	Wheat	cytosol, plastid	42.68	35.35
TraesCS4A01G096300.1	Wheat	cytosol	42.68	35.35
Os03t0272900-02	Rice	cytosol	41.46	34.69
HORVU4Hr1G059950.1	Barley	cytosol	42.68	34.31
TraesCS5B01G085600.1	Wheat	plastid	31.71	34.21
HORVU5Hr1G020880.1	Barley	plastid	31.71	34.21
OQU92832	Sorghum	cytosol, mitochondrion, plastid	43.9	33.96
TraesCS5A01G080800.1	Wheat	plastid	31.71	33.77
Os05t0458200-01	Rice	nucleus	31.71	29.89
HORVU3Hr1G086090.1	Barley	cytosol, plastid	37.8	28.97
GSMUA_Achr11P...	Banana	cytosol	37.8	24.8
GSMUA_Achr5P28710_001	Banana	plastid	39.02	23.7

Protein Annotations

EnsemblPlants:CDX93246	EnsemblPlantsGene:GSBRNA2T00155202001	InterPro:DVL	PANTHER:PTHR33102	PANTHER:PTHR33102:SF9	PFAM:PF08137
ProteinID:CDX93246	ProteinID:CDX93246.1	UniParc:UPI0004EEF68B	MapMan:11.10.1.6.1	:	:

Description

BnaC04g46500D

Coordinates

chrLK031875:-:538226..538498

Molecular Weight (calculated)

9331.4 Da

IEP (calculated)

11.011

GRAVY (calculated)

-0.511

Length

82 amino acids

Sequence
(BLAST)

1: MASSGLTRSG SAPQFEKWKL SKKDGFSGGT LKITRSSLTQ KQGRCAFTRK CAGLVKEQRA RFYIMRRCVI MLICWRDNYS DS

Best Arabidopsis Sequence Match ( AT2G39705.1 )
(BLAST)

1: MASSSSLTRS GSVHLDEKWK LSKKDGGASR ITRSSSTSSS SFNGKKQGRC AFTRKCARLV KEQRARFYIM RRCVIMLICW RDNYSDS

Arabidopsis Description

RTFL8RTFL8 [Source:UniProtKB/TrEMBL;Acc:A0A178VQG8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.