Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 6
- cytosol 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr9P03880_001 | Banana | nucleus | 39.26 | 61.63 |
| GSMUA_Achr6P34070_001 | Banana | cytosol | 25.93 | 60.34 |
| GSMUA_Achr7P10600_001 | Banana | nucleus | 32.59 | 53.66 |
| GSMUA_Achr10P... | Banana | nucleus | 29.63 | 51.95 |
| GSMUA_Achr2P16410_001 | Banana | nucleus | 29.63 | 50.63 |
| GSMUA_Achr6P15210_001 | Banana | cytosol, plastid | 31.11 | 49.41 |
| GSMUA_Achr9P28300_001 | Banana | nucleus | 24.44 | 47.83 |
| VIT_13s0019g01890.t01 | Wine grape | plastid | 28.15 | 45.78 |
| KRH15084 | Soybean | plastid | 27.41 | 45.68 |
| KRH73051 | Soybean | plastid | 27.41 | 44.05 |
| PGSC0003DMT400016270 | Potato | nucleus, plastid | 22.96 | 43.66 |
| AT2G39705.1 | Thale cress | plastid | 25.93 | 40.23 |
| CDX93246 | Canola | plastid | 23.7 | 39.02 |
| CDY07025 | Canola | plastid | 23.7 | 39.02 |
| AT3G55515.1 | Thale cress | nucleus | 21.48 | 36.71 |
| Bra017058.1-P | Field mustard | plastid | 22.22 | 33.33 |
| CDY41215 | Canola | nucleus | 20.74 | 32.94 |
| GSMUA_Achr11P... | Banana | cytosol | 30.37 | 32.8 |
| Bra005022.1-P | Field mustard | plastid | 22.96 | 32.29 |
| CDY40235 | Canola | nucleus | 20.74 | 31.82 |
| Bra007172.1-P | Field mustard | nucleus | 20.74 | 31.82 |
| CDY69313 | Canola | plastid | 22.22 | 31.25 |
| CDX74841 | Canola | plastid | 22.22 | 31.25 |
| CDY20471 | Canola | plastid | 22.22 | 31.25 |
| KRG93907 | Soybean | mitochondrion | 16.3 | 29.73 |
| CDY02946 | Canola | nucleus, plastid | 18.52 | 28.41 |
| KRG97895 | Soybean | cytosol, plastid | 22.96 | 28.18 |
| KRH30989 | Soybean | plastid | 21.48 | 26.61 |
| Bra014737.1-P | Field mustard | nucleus | 17.04 | 26.14 |
| CDX76087 | Canola | nucleus | 17.04 | 26.14 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr5P28710_001 | EnsemblPlants:GSMUA_Achr5T28710_001 | EnsemblPlantsGene:GSMUA_Achr5G28710_001 | InterPro:DVL | PANTHER:PTHR33102 | PANTHER:PTHR33102:SF3 |
| PFAM:PF08137 | SEG:seg | UniParc:UPI0002950011 | UniProt:M0T2J5 | MapMan:11.10.1.6.1 | : |
Description
Putative expressed protein [Source:GMGC_GENE;Acc:GSMUA_Achr5G28710_001]
Coordinates
chr5:+:28766284..28766691
Molecular Weight (calculated)
15066.9 Da
IEP (calculated)
10.397
GRAVY (calculated)
-0.437
Length
135 amino acids
Sequence
(BLAST)
(BLAST)
001: MPAAHHQPSA LLSPSLHPHS FPFLPPYHAD PFRLSFFTKG FACSFAVSLS FNMDEKRKLS KEESRNSCSG SRRVVAEGSG PFAKESASAR EGQRGRTTTA
101: SSFSSRCASV AKEQRAKFYI VRRCVTMLIC WRDYP
101: SSFSSRCASV AKEQRAKFYI VRRCVTMLIC WRDYP
1: MAPEENGTCE PCKTFGQKCS HVVKKQRAKF YILRRCIAML VCWHDQNHDR KDS
Arabidopsis Description
ROT4At2g36985 [Source:UniProtKB/TrEMBL;Acc:Q7XXN8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.