Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 3
- nucleus 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr6P34070_001 | Banana | cytosol | 28.8 | 62.07 |
| GSMUA_Achr9P03880_001 | Banana | nucleus | 42.4 | 61.63 |
| GSMUA_Achr9P28300_001 | Banana | nucleus | 32.0 | 57.97 |
| GSMUA_Achr10P... | Banana | nucleus | 34.4 | 55.84 |
| GSMUA_Achr7P10600_001 | Banana | nucleus | 36.0 | 54.88 |
| GSMUA_Achr6P15210_001 | Banana | cytosol, plastid | 35.2 | 51.76 |
| KRH15084 | Soybean | plastid | 31.2 | 48.15 |
| GSMUA_Achr2P16410_001 | Banana | nucleus | 29.6 | 46.84 |
| KRH73051 | Soybean | plastid | 31.2 | 46.43 |
| PGSC0003DMT400016270 | Potato | nucleus, plastid | 25.6 | 45.07 |
| VIT_13s0019g01890.t01 | Wine grape | plastid | 28.0 | 42.17 |
| CDY07025 | Canola | plastid | 24.8 | 37.8 |
| CDX93246 | Canola | plastid | 24.8 | 37.8 |
| CDY20471 | Canola | plastid | 28.8 | 37.5 |
| Bra005022.1-P | Field mustard | plastid | 28.8 | 37.5 |
| CDY69313 | Canola | plastid | 28.8 | 37.5 |
| CDX74841 | Canola | plastid | 28.8 | 37.5 |
| Bra017058.1-P | Field mustard | plastid | 26.4 | 36.67 |
| AT2G39705.1 | Thale cress | plastid | 24.0 | 34.48 |
| AT3G55515.1 | Thale cress | nucleus | 20.8 | 32.91 |
| GSMUA_Achr5P28710_001 | Banana | plastid | 32.8 | 30.37 |
| KRG93907 | Soybean | mitochondrion | 17.6 | 29.73 |
| KRH30989 | Soybean | plastid | 25.6 | 29.36 |
| KRG97895 | Soybean | cytosol, plastid | 25.6 | 29.09 |
| CDY41215 | Canola | nucleus | 19.2 | 28.24 |
| Bra007172.1-P | Field mustard | nucleus | 19.2 | 27.27 |
| CDY40235 | Canola | nucleus | 19.2 | 27.27 |
| CDY02946 | Canola | nucleus, plastid | 18.4 | 26.14 |
| CDX76087 | Canola | nucleus | 17.6 | 25.0 |
| Bra014737.1-P | Field mustard | nucleus | 17.6 | 25.0 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr11P24340_001 | EnsemblPlants:GSMUA_Achr11T24340_001 | EnsemblPlantsGene:GSMUA_Achr11G24340_001 | InterPro:DVL | PANTHER:PTHR33102 | PANTHER:PTHR33102:SF3 |
| PFAM:PF08137 | SEG:seg | UniParc:UPI000296C51C | UniProt:M0RV14 | MapMan:11.10.1.6.1 | : |
Description
Putative expressed protein [Source:GMGC_GENE;Acc:GSMUA_Achr11G24340_001]
Coordinates
chr11:-:23933454..23933831
Molecular Weight (calculated)
14318.2 Da
IEP (calculated)
9.616
GRAVY (calculated)
-0.485
Length
125 amino acids
Sequence
(BLAST)
(BLAST)
001: MPIAHHESTP ISSFPLYIPL VAPSEIVDVV GEEVEIYMDE KWKVANKEIR NSCSGGRRVV AAAEEEGGPF LKRSASTREG RRRTTTIKTS RSFSSRCANQ
101: VKEQRARLYI MRRCVTMLVC WRDYH
101: VKEQRARLYI MRRCVTMLVC WRDYH
1: MASSSSLTRS GSVHLDEKWK LSKKDGGASR ITRSSSTSSS SFNGKKQGRC AFTRKCARLV KEQRARFYIM RRCVIMLICW RDNYSDS
Arabidopsis Description
RTFL8RTFL8 [Source:UniProtKB/TrEMBL;Acc:A0A178VQG8]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.