Factsheet for Bra005022.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
plastid 7
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX74841	Canola	plastid	98.96	98.96
CDY20471	Canola	plastid	98.96	98.96
CDY69313	Canola	plastid	98.96	98.96
Bra017058.1-P	Field mustard	plastid	65.62	70.0
AT2G39705.1	Thale cress	plastid	54.17	59.77
GSMUA_Achr6P34070_001	Banana	cytosol	34.38	56.9
Os12t0573600-01	Rice	nucleus	34.38	53.23
Zm00001d030750_P001	Maize	nucleus, plastid	36.46	47.95
KXG23778	Sorghum	plastid	40.62	46.99
GSMUA_Achr10P...	Banana	nucleus	36.46	45.45
TraesCS1B01G292500.1	Wheat	nucleus, plastid	28.12	45.0
GSMUA_Achr9P28300_001	Banana	nucleus	32.29	44.93
KXG33681	Sorghum	cytosol	31.25	44.78
TraesCS5D01G091800.1	Wheat	plastid	35.42	44.74
Bra014737.1-P	Field mustard	nucleus	40.62	44.32
TraesCS5A01G080800.1	Wheat	plastid	35.42	44.16
TraesCS3B01G393600.1	Wheat	nucleus	32.29	43.66
GSMUA_Achr6P15210_001	Banana	cytosol, plastid	38.54	43.53
TraesCS5B01G085600.1	Wheat	plastid	34.38	43.42
HORVU5Hr1G020880.1	Barley	plastid	34.38	43.42
Os01t0844200-01	Rice	mitochondrion	34.38	43.42
KXG23779	Sorghum	nucleus	32.29	43.06
GSMUA_Achr2P16410_001	Banana	nucleus	35.42	43.04
GSMUA_Achr9P03880_001	Banana	nucleus	38.54	43.02
GSMUA_Achr7P10600_001	Banana	nucleus	36.46	42.68
TraesCS3A01G361200.1	Wheat	cytosol, mitochondrion, nucleus	32.29	42.47
TraesCS1A01G283300.1	Wheat	mitochondrion, nucleus	26.04	41.67
Bra007172.1-P	Field mustard	nucleus	36.46	39.77
Zm00001d012414_P001	Maize	cytosol	30.21	39.19
HORVU1Hr1G072580.1	Barley	nucleus, plastid	29.17	38.36
Zm00001d042900_P001	Maize	plastid	30.21	38.16
Zm00001d041535_P001	Maize	plastid	26.04	37.31
TraesCS4A01G096300.1	Wheat	cytosol	36.46	35.35
Os03t0272900-02	Rice	cytosol	35.42	34.69
TraesCS4B01G208100.1	Wheat	cytosol, plastid	34.38	33.33
TraesCS4D01G209000.1	Wheat	cytosol	34.38	33.33
HORVU4Hr1G059950.1	Barley	cytosol	34.38	32.35
Zm00001d028598_P001	Maize	cytosol	32.29	31.31
Zm00001d047820_P001	Maize	cytosol, mitochondrion, nucleus	32.29	31.31
Os05t0458200-01	Rice	nucleus	28.12	31.03
OQU92832	Sorghum	cytosol, mitochondrion, plastid	32.29	29.25
HORVU3Hr1G086090.1	Barley	cytosol, plastid	32.29	28.97
GSMUA_Achr11P...	Banana	cytosol	37.5	28.8
GSMUA_Achr5P28710_001	Banana	plastid	32.29	22.96

Protein Annotations

EnsemblPlants:Bra005022.1	EnsemblPlants:Bra005022.1-P	EnsemblPlantsGene:Bra005022	InterPro:DVL	PANTHER:PTHR33102	PANTHER:PTHR33102:SF9
PFAM:PF08137	SEG:seg	UniParc:UPI00025473E7	UniProt:M4CLD5	MapMan:11.10.1.6.1	:

Description

AT2G39705 (E=6e-026) RTFL8, DVL11 | RTFL8 (ROTUNDIFOLIA LIKE 8)

Coordinates

chrA05:-:3016880..3017170

Molecular Weight (calculated)

10747.0 Da

IEP (calculated)

11.069

GRAVY (calculated)

-0.585

Length

96 amino acids

Sequence
(BLAST)

1: MASTGLTRSG SAPQFHLDEK WKLAKKDSLS GGAARITRSS STSSIPMNGG KKTHKQGRCA FTRKCASLVK EQRARFYIMR RCVIMLVCWR DNYSDS

Best Arabidopsis Sequence Match ( AT2G39705.1 )
(BLAST)

1: MASSSSLTRS GSVHLDEKWK LSKKDGGASR ITRSSSTSSS SFNGKKQGRC AFTRKCARLV KEQRARFYIM RRCVIMLICW RDNYSDS

Arabidopsis Description

RTFL8RTFL8 [Source:UniProtKB/TrEMBL;Acc:A0A178VQG8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.