CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	plastid
ChloroP:	plastid
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY20471	Canola	plastid	100.0	100.0
CDY69313	Canola	plastid	100.0	100.0
Bra005022.1-P	Field mustard	plastid	98.96	98.96
AT2G39705.1	Thale cress	plastid	55.21	60.92
CDY07025	Canola	plastid	48.96	57.32
CDX93246	Canola	plastid	47.92	56.1
GSMUA_Achr6P34070_001	Banana	cytosol	33.33	55.17
Os12t0573600-01	Rice	nucleus	33.33	51.61
Zm00001d030750_P001	Maize	nucleus, plastid	36.46	47.95
TraesCS1B01G292500.1	Wheat	nucleus, plastid	29.17	46.67
KXG33681	Sorghum	cytosol	32.29	46.27
KXG23778	Sorghum	plastid	39.58	45.78
CDY02946	Canola	nucleus, plastid	41.67	45.45
CDX76087	Canola	nucleus	41.67	45.45
TraesCS3B01G393600.1	Wheat	nucleus	33.33	45.07
GSMUA_Achr9P28300_001	Banana	nucleus	32.29	44.93
Os01t0844200-01	Rice	mitochondrion	35.42	44.74
GSMUA_Achr2P16410_001	Banana	nucleus	36.46	44.3
GSMUA_Achr10P...	Banana	nucleus	35.42	44.16
TraesCS3A01G361200.1	Wheat	cytosol, mitochondrion, nucleus	33.33	43.84
TraesCS5D01G091800.1	Wheat	plastid	34.38	43.42
TraesCS1A01G283300.1	Wheat	mitochondrion, nucleus	27.08	43.33
TraesCS5A01G080800.1	Wheat	plastid	34.38	42.86
CDY41215	Canola	nucleus	37.5	42.35
GSMUA_Achr6P15210_001	Banana	cytosol, plastid	37.5	42.35
TraesCS5B01G085600.1	Wheat	plastid	33.33	42.11
HORVU5Hr1G020880.1	Barley	plastid	33.33	42.11
GSMUA_Achr9P03880_001	Banana	nucleus	37.5	41.86
KXG23779	Sorghum	nucleus	31.25	41.67
GSMUA_Achr7P10600_001	Banana	nucleus	35.42	41.46
CDY40235	Canola	nucleus	37.5	40.91
Zm00001d012414_P001	Maize	cytosol	31.25	40.54
HORVU1Hr1G072580.1	Barley	nucleus, plastid	30.21	39.73
Zm00001d042900_P001	Maize	plastid	31.25	39.47
Zm00001d041535_P001	Maize	plastid	25.0	35.82
TraesCS4A01G096300.1	Wheat	cytosol	36.46	35.35
Os03t0272900-02	Rice	cytosol	35.42	34.69
TraesCS4B01G208100.1	Wheat	cytosol, plastid	34.38	33.33
TraesCS4D01G209000.1	Wheat	cytosol	34.38	33.33
HORVU4Hr1G059950.1	Barley	cytosol	34.38	32.35
Os05t0458200-01	Rice	nucleus	29.17	32.18
Zm00001d047820_P001	Maize	cytosol, mitochondrion, nucleus	32.29	31.31
Zm00001d028598_P001	Maize	cytosol	32.29	31.31
HORVU3Hr1G086090.1	Barley	cytosol, plastid	33.33	29.91
OQU92832	Sorghum	cytosol, mitochondrion, plastid	32.29	29.25
GSMUA_Achr11P...	Banana	cytosol	37.5	28.8
GSMUA_Achr5P28710_001	Banana	plastid	31.25	22.22

Protein Annotations

EnsemblPlants:CDX74841	EnsemblPlantsGene:GSBRNA2T00116822001	InterPro:DVL	PANTHER:PTHR33102	PANTHER:PTHR33102:SF9	PFAM:PF08137
ProteinID:CDX74841	ProteinID:CDX74841.1	ProteinID:CDY20471.1	ProteinID:CDY69313.1	SEG:seg	UniParc:UPI0004EB9B23
UniProt:A0A078CCM2	MapMan:11.10.1.6.1	:	:	:	:

Description

BnaA05g05870DBnaA05g05870D protein [Source:UniProtKB/TrEMBL;Acc:A0A078CCM2]

Coordinates

chrLK031802:-:920358..921038

Molecular Weight (calculated)

10816.1 Da

IEP (calculated)

11.235

GRAVY (calculated)

-0.624

Length

96 amino acids

Sequence
(BLAST)

1: MASTGLTRSG SAPQFHLDEK WKLAKKDSLS GGAARITRSS STSSIPMNGG KKTHKQGRCA FTRKCARLVK EQRARFYIMR RCVIMLVCWR DNYSDS

Best Arabidopsis Sequence Match ( AT2G39705.1 )
(BLAST)

1: MASSSSLTRS GSVHLDEKWK LSKKDGGASR ITRSSSTSSS SFNGKKQGRC AFTRKCARLV KEQRARFYIM RRCVIMLICW RDNYSDS

Arabidopsis Description

RTFL8RTFL8 [Source:UniProtKB/TrEMBL;Acc:A0A178VQG8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.