Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d030750_P001 | Maize | nucleus, plastid | 56.72 | 52.05 |
| TraesCS5D01G091800.1 | Wheat | plastid | 58.21 | 51.32 |
| TraesCS5B01G085600.1 | Wheat | plastid | 58.21 | 51.32 |
| HORVU5Hr1G020880.1 | Barley | plastid | 56.72 | 50.0 |
| TraesCS5A01G080800.1 | Wheat | plastid | 56.72 | 49.35 |
| GSMUA_Achr9P28300_001 | Banana | nucleus | 49.25 | 47.83 |
| GSMUA_Achr6P34070_001 | Banana | cytosol | 40.3 | 46.55 |
| GSMUA_Achr10P... | Banana | nucleus | 49.25 | 42.86 |
| KXG23778 | Sorghum | plastid | 52.24 | 42.17 |
| GSMUA_Achr2P16410_001 | Banana | nucleus | 46.27 | 39.24 |
| Zm00001d012414_P001 | Maize | cytosol | 43.28 | 39.19 |
| Zm00001d042900_P001 | Maize | plastid | 38.81 | 34.21 |
| PGSC0003DMT400016270 | Potato | nucleus, plastid | 35.82 | 33.8 |
| VIT_13s0019g01890.t01 | Wine grape | plastid | 41.79 | 33.73 |
| CDY07025 | Canola | plastid | 37.31 | 30.49 |
| AT2G39705.1 | Thale cress | plastid | 38.81 | 29.89 |
| KRH73051 | Soybean | plastid | 37.31 | 29.76 |
| KRH15084 | Soybean | plastid | 35.82 | 29.63 |
| CDX93246 | Canola | plastid | 35.82 | 29.27 |
| AT3G55515.1 | Thale cress | nucleus | 34.33 | 29.11 |
| Bra017058.1-P | Field mustard | plastid | 37.31 | 27.78 |
| Zm00001d047820_P001 | Maize | cytosol, mitochondrion, nucleus | 40.3 | 27.27 |
| KRG93907 | Soybean | mitochondrion | 29.85 | 27.03 |
| Zm00001d028598_P001 | Maize | cytosol | 38.81 | 26.26 |
| CDY02946 | Canola | nucleus, plastid | 34.33 | 26.14 |
| CDX76087 | Canola | nucleus | 34.33 | 26.14 |
| Bra014737.1-P | Field mustard | nucleus | 34.33 | 26.14 |
| Bra005022.1-P | Field mustard | plastid | 37.31 | 26.04 |
| CDY69313 | Canola | plastid | 35.82 | 25.0 |
| CDY20471 | Canola | plastid | 35.82 | 25.0 |
| CDX74841 | Canola | plastid | 35.82 | 25.0 |
| KRH30989 | Soybean | plastid | 35.82 | 22.02 |
| CDY41215 | Canola | nucleus | 26.87 | 21.18 |
| KRG97895 | Soybean | cytosol, plastid | 34.33 | 20.91 |
| CDY40235 | Canola | nucleus | 26.87 | 20.45 |
| Bra007172.1-P | Field mustard | nucleus | 26.87 | 20.45 |
Protein Annotations
| EnsemblPlants:Zm00001d041535_P001 | EnsemblPlants:Zm00001d041535_T001 | EnsemblPlantsGene:Zm00001d041535 | InterPro:DVL | PANTHER:PTHR33102 | PANTHER:PTHR33102:SF3 |
| PFAM:PF08137 | ProteinID:ONM33212.1 | UniParc:UPI000842F62F | UniProt:A0A1D6MWS9 | MapMan:11.10.1.6.1 | : |
Description
ROTUNDIFOLIA like 8
Coordinates
chr3:-:126110008..126110211
Molecular Weight (calculated)
7394.2 Da
IEP (calculated)
12.229
GRAVY (calculated)
-0.719
Length
67 amino acids
Sequence
(BLAST)
(BLAST)
1: MNDKSKKGRR RSTPGSPGCP AAGLKSRGSR APPGRSVPGR LASLVKEQRA RLYIVRRCVT MLLCWRD
001: MAEFKSKLNK GHAFTSKCAS LVKEQRARLY ILRRCATMLC CWYIQGDDSP LAAWQNPFTR NLTLSSDIFW CKTLLQAYKT ERERTRDLSA KRAGVFTVSE
101: TETVEMLIL
101: TETVEMLIL
Arabidopsis Description
RTFL9ROTUNDIFOLIA like 9 [Source:UniProtKB/TrEMBL;Acc:F4HTB2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.