CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 3
plastid 5
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH15084	Soybean	plastid	45.87	61.73
KRH73051	Soybean	plastid	46.79	60.71
KRG97895	Soybean	cytosol, plastid	55.05	54.55
PGSC0003DMT400016270	Potato	nucleus, plastid	34.86	53.52
KRG93907	Soybean	mitochondrion	35.78	52.7
GSMUA_Achr6P34070_001	Banana	cytosol	27.52	51.72
KXG33681	Sorghum	cytosol	27.52	44.78
AT3G55515.1	Thale cress	nucleus	32.11	44.3
TraesCS1B01G292500.1	Wheat	nucleus, plastid	23.85	43.33
GSMUA_Achr7P10600_001	Banana	nucleus	32.11	42.68
Os01t0844200-01	Rice	mitochondrion	29.36	42.11
Os12t0573600-01	Rice	nucleus	23.85	41.94
GSMUA_Achr9P03880_001	Banana	nucleus	33.03	41.86
GSMUA_Achr10P...	Banana	nucleus	29.36	41.56
GSMUA_Achr6P15210_001	Banana	cytosol, plastid	32.11	41.18
TraesCS1A01G283300.1	Wheat	mitochondrion, nucleus	22.02	40.0
TraesCS3A01G361200.1	Wheat	cytosol, mitochondrion, nucleus	26.61	39.73
TraesCS3B01G393600.1	Wheat	nucleus	25.69	39.44
Zm00001d012414_P001	Maize	cytosol	26.61	39.19
KXG23779	Sorghum	nucleus	25.69	38.89
Bra014737.1-P	Field mustard	nucleus	31.19	38.64
CDX76087	Canola	nucleus	31.19	38.64
Zm00001d030750_P001	Maize	nucleus, plastid	25.69	38.36
GSMUA_Achr2P16410_001	Banana	nucleus	27.52	37.97
GSMUA_Achr9P28300_001	Banana	nucleus	23.85	37.68
CDY02946	Canola	nucleus, plastid	30.28	37.5
HORVU1Hr1G072580.1	Barley	nucleus, plastid	24.77	36.99
Zm00001d042900_P001	Maize	plastid	25.69	36.84
KXG23778	Sorghum	plastid	27.52	36.14
Zm00001d041535_P001	Maize	plastid	22.02	35.82
CDY41215	Canola	nucleus	27.52	35.29
Bra007172.1-P	Field mustard	nucleus	27.52	34.09
CDY40235	Canola	nucleus	27.52	34.09
Zm00001d028598_P001	Maize	cytosol	30.28	33.33
TraesCS5A01G080800.1	Wheat	plastid	22.94	32.47
TraesCS5D01G091800.1	Wheat	plastid	22.02	31.58
Zm00001d047820_P001	Maize	cytosol, mitochondrion, nucleus	28.44	31.31
Os03t0272900-02	Rice	cytosol	27.52	30.61
TraesCS4A01G096300.1	Wheat	cytosol	27.52	30.3
TraesCS4B01G208100.1	Wheat	cytosol, plastid	27.52	30.3
TraesCS4D01G209000.1	Wheat	cytosol	27.52	30.3
TraesCS5B01G085600.1	Wheat	plastid	21.1	30.26
HORVU5Hr1G020880.1	Barley	plastid	21.1	30.26
HORVU4Hr1G059950.1	Barley	cytosol	27.52	29.41
OQU92832	Sorghum	cytosol, mitochondrion, plastid	28.44	29.25
Os05t0458200-01	Rice	nucleus	22.94	28.74
HORVU3Hr1G086090.1	Barley	cytosol, plastid	27.52	28.04
GSMUA_Achr11P...	Banana	cytosol	29.36	25.6
GSMUA_Achr5P28710_001	Banana	plastid	26.61	21.48

Protein Annotations

EMBL:ACUP02007116	EnsemblPlants:KRH30989	EnsemblPlantsGene:GLYMA_11G220000	EntrezGene:100815379	InterPro:DVL	PFAM:PF08137
ProteinID:KRH30989	ProteinID:KRH30989.1	SEG:seg	UniParc:UPI000233D133	UniProt:I1LMG2	MapMan:11.10.1.6.1

Description

hypothetical protein

Coordinates

chr11:+:31534670..31535479

Molecular Weight (calculated)

12190.3 Da

IEP (calculated)

10.204

GRAVY (calculated)

-0.795

Length

109 amino acids

Sequence
(BLAST)

001: MVSSNCAPTC SNGTTTAGNN NNNNNNTDQT TAPPLYFSNS EKLRLPKKEG RSSTTSSPLI KNSSSSSSTQ RKCAFARKCA RLVKEQRARF YIMRRCVIML
101: ICWHEYNDS

Best Arabidopsis Sequence Match ( AT2G39705.1 )
(BLAST)

1: MASSSSLTRS GSVHLDEKWK LSKKDGGASR ITRSSSTSSS SFNGKKQGRC AFTRKCARLV KEQRARFYIM RRCVIMLICW RDNYSDS

Arabidopsis Description

RTFL8RTFL8 [Source:UniProtKB/TrEMBL;Acc:A0A178VQG8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.