CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 3
plastid 5
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH15084	Soybean	plastid	91.67	95.06
VIT_13s0019g01890.t01	Wine grape	plastid	64.29	65.06
PGSC0003DMT400016270	Potato	nucleus, plastid	53.57	63.38
GSMUA_Achr6P34070_001	Banana	cytosol	40.48	58.62
Os12t0573600-01	Rice	nucleus	36.9	50.0
TraesCS1B01G292500.1	Wheat	nucleus, plastid	35.71	50.0
GSMUA_Achr2P16410_001	Banana	nucleus	46.43	49.37
GSMUA_Achr10P...	Banana	nucleus	44.05	48.05
GSMUA_Achr9P03880_001	Banana	nucleus	48.81	47.67
GSMUA_Achr7P10600_001	Banana	nucleus	46.43	47.56
KRH30989	Soybean	plastid	60.71	46.79
TraesCS3A01G361200.1	Wheat	cytosol, mitochondrion, nucleus	40.48	46.58
KXG33681	Sorghum	cytosol	36.9	46.27
GSMUA_Achr6P15210_001	Banana	cytosol, plastid	46.43	45.88
TraesCS3B01G393600.1	Wheat	nucleus	38.1	45.07
GSMUA_Achr9P28300_001	Banana	nucleus	35.71	43.48
Os01t0844200-01	Rice	mitochondrion	39.29	43.42
Zm00001d030750_P001	Maize	nucleus, plastid	36.9	42.47
KXG23778	Sorghum	plastid	41.67	42.17
TraesCS1A01G283300.1	Wheat	mitochondrion, nucleus	29.76	41.67
KXG23779	Sorghum	nucleus	35.71	41.67
Zm00001d012414_P001	Maize	cytosol	35.71	40.54
KRG93907	Soybean	mitochondrion	35.71	40.54
Os03t0272900-02	Rice	cytosol	46.43	39.8
HORVU1Hr1G072580.1	Barley	nucleus, plastid	34.52	39.73
Zm00001d042900_P001	Maize	plastid	35.71	39.47
Zm00001d028598_P001	Maize	cytosol	46.43	39.39
TraesCS4A01G096300.1	Wheat	cytosol	46.43	39.39
TraesCS4B01G208100.1	Wheat	cytosol, plastid	46.43	39.39
TraesCS4D01G209000.1	Wheat	cytosol	46.43	39.39
TraesCS5A01G080800.1	Wheat	plastid	34.52	37.66
Zm00001d041535_P001	Maize	plastid	29.76	37.31
KRG97895	Soybean	cytosol, plastid	48.81	37.27
HORVU4Hr1G059950.1	Barley	cytosol	45.24	37.25
TraesCS5D01G091800.1	Wheat	plastid	33.33	36.84
Zm00001d047820_P001	Maize	cytosol, mitochondrion, nucleus	42.86	36.36
TraesCS5B01G085600.1	Wheat	plastid	32.14	35.53
HORVU5Hr1G020880.1	Barley	plastid	32.14	35.53
OQU92832	Sorghum	cytosol, mitochondrion, plastid	44.05	34.91
HORVU3Hr1G086090.1	Barley	cytosol, plastid	41.67	32.71
GSMUA_Achr11P...	Banana	cytosol	46.43	31.2
Os05t0458200-01	Rice	nucleus	30.95	29.89
GSMUA_Achr5P28710_001	Banana	plastid	44.05	27.41

Protein Annotations

EMBL:ACUP02001263	EnsemblPlants:KRH73051	EnsemblPlantsGene:GLYMA_02G248900	InterPro:DVL	PANTHER:PTHR33102	PANTHER:PTHR33102:SF9
PFAM:PF08137	ProteinID:KRH73051	ProteinID:KRH73051.1	SEG:seg	UniParc:UPI0002337B8B	UniProt:I1JI03
MapMan:11.10.1.6.1	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr2:+:43650591..43652074

Molecular Weight (calculated)

9707.6 Da

IEP (calculated)

10.692

GRAVY (calculated)

-0.674

Length

84 amino acids

Sequence
(BLAST)

1: MASSVSTTPP MYFDEKWKLS KKEGSTRSRS SSTSTPFIKN SSSSQRRCAF ASKCAKLVKE QRARFYIMRR CVTMLICWRD YSDS

Best Arabidopsis Sequence Match ( AT2G39705.1 )
(BLAST)

1: MASSSSLTRS GSVHLDEKWK LSKKDGGASR ITRSSSTSSS SFNGKKQGRC AFTRKCARLV KEQRARFYIM RRCVIMLICW RDNYSDS

Arabidopsis Description

RTFL8RTFL8 [Source:UniProtKB/TrEMBL;Acc:A0A178VQG8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.