CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 3
plastid 5
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH73051	Soybean	plastid	95.06	91.67
VIT_13s0019g01890.t01	Wine grape	plastid	69.14	67.47
PGSC0003DMT400016270	Potato	nucleus, plastid	55.56	63.38
GSMUA_Achr6P34070_001	Banana	cytosol	41.98	58.62
TraesCS1B01G292500.1	Wheat	nucleus, plastid	38.27	51.67
GSMUA_Achr2P16410_001	Banana	nucleus	48.15	49.37
KXG33681	Sorghum	cytosol	40.74	49.25
GSMUA_Achr7P10600_001	Banana	nucleus	49.38	48.78
Os12t0573600-01	Rice	nucleus	37.04	48.39
GSMUA_Achr10P...	Banana	nucleus	45.68	48.05
TraesCS3A01G361200.1	Wheat	cytosol, mitochondrion, nucleus	43.21	47.95
GSMUA_Achr9P03880_001	Banana	nucleus	50.62	47.67
Os01t0844200-01	Rice	mitochondrion	44.44	47.37
TraesCS3B01G393600.1	Wheat	nucleus	40.74	46.48
GSMUA_Achr6P15210_001	Banana	cytosol, plastid	48.15	45.88
KRH30989	Soybean	plastid	61.73	45.87
GSMUA_Achr9P28300_001	Banana	nucleus	37.04	43.48
TraesCS1A01G283300.1	Wheat	mitochondrion, nucleus	32.1	43.33
Zm00001d012414_P001	Maize	cytosol	39.51	43.24
HORVU1Hr1G072580.1	Barley	nucleus, plastid	38.27	42.47
KXG23778	Sorghum	plastid	43.21	42.17
Zm00001d042900_P001	Maize	plastid	39.51	42.11
KRG93907	Soybean	mitochondrion	38.27	41.89
Zm00001d030750_P001	Maize	nucleus, plastid	37.04	41.1
Os03t0272900-02	Rice	cytosol	48.15	39.8
KXG23779	Sorghum	nucleus	34.57	38.89
TraesCS4B01G208100.1	Wheat	cytosol, plastid	46.91	38.38
TraesCS4A01G096300.1	Wheat	cytosol	46.91	38.38
TraesCS4D01G209000.1	Wheat	cytosol	46.91	38.38
Zm00001d028598_P001	Maize	cytosol	46.91	38.38
TraesCS5A01G080800.1	Wheat	plastid	35.8	37.66
Zm00001d047820_P001	Maize	cytosol, mitochondrion, nucleus	45.68	37.37
KRG97895	Soybean	cytosol, plastid	50.62	37.27
HORVU4Hr1G059950.1	Barley	cytosol	46.91	37.25
TraesCS5D01G091800.1	Wheat	plastid	34.57	36.84
Zm00001d041535_P001	Maize	plastid	29.63	35.82
TraesCS5B01G085600.1	Wheat	plastid	33.33	35.53
HORVU5Hr1G020880.1	Barley	plastid	33.33	35.53
OQU92832	Sorghum	cytosol, mitochondrion, plastid	45.68	34.91
HORVU3Hr1G086090.1	Barley	cytosol, plastid	44.44	33.64
GSMUA_Achr11P...	Banana	cytosol	48.15	31.2
Os05t0458200-01	Rice	nucleus	30.86	28.74
GSMUA_Achr5P28710_001	Banana	plastid	45.68	27.41

Protein Annotations

EMBL:ACUP02008560	EMBL:BT097912	EnsemblPlants:KRH15084	EnsemblPlantsGene:GLYMA_14G067500	EntrezGene:100803152	InterPro:DVL
PANTHER:PTHR33102	PANTHER:PTHR33102:SF9	PFAM:PF08137	ProteinID:KRH15084	ProteinID:KRH15084.1	UniParc:UPI0001B16880
UniProt:C6TJR2	MapMan:11.10.1.6.1	:	:	:	:

Description

hypothetical protein

Coordinates

chr14:-:5596952..5598076

Molecular Weight (calculated)

9442.3 Da

IEP (calculated)

10.769

GRAVY (calculated)

-0.654

Length

81 amino acids

Sequence
(BLAST)

1: MASSVSTTPP LYFDEKWKLS KKEGSTRSRS SSTPFIKNSS SQRRCAFASK CARLVKEQRA RFYIMRRCVT MLICWRDYSD S

Best Arabidopsis Sequence Match ( AT2G39705.1 )
(BLAST)

1: MASSSSLTRS GSVHLDEKWK LSKKDGGASR ITRSSSTSSS SFNGKKQGRC AFTRKCARLV KEQRARFYIM RRCVIMLICW RDNYSDS

Arabidopsis Description

RTFL8RTFL8 [Source:UniProtKB/TrEMBL;Acc:A0A178VQG8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.