Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 5
- cytosol 1
- nucleus 2
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY07025 | Canola | plastid | 57.47 | 60.98 |
| GSMUA_Achr6P34070_001 | Banana | cytosol | 40.23 | 60.34 |
| Bra017058.1-P | Field mustard | plastid | 62.07 | 60.0 |
| CDX93246 | Canola | plastid | 56.32 | 59.76 |
| CDX74841 | Canola | plastid | 60.92 | 55.21 |
| CDY20471 | Canola | plastid | 60.92 | 55.21 |
| CDY69313 | Canola | plastid | 60.92 | 55.21 |
| Bra005022.1-P | Field mustard | plastid | 59.77 | 54.17 |
| TraesCS1B01G292500.1 | Wheat | nucleus, plastid | 33.33 | 48.33 |
| TraesCS3A01G361200.1 | Wheat | cytosol, mitochondrion, nucleus | 40.23 | 47.95 |
| Os12t0573600-01 | Rice | nucleus | 33.33 | 46.77 |
| TraesCS1A01G283300.1 | Wheat | mitochondrion, nucleus | 32.18 | 46.67 |
| TraesCS3B01G393600.1 | Wheat | nucleus | 37.93 | 46.48 |
| KXG33681 | Sorghum | cytosol | 35.63 | 46.27 |
| GSMUA_Achr10P... | Banana | nucleus | 40.23 | 45.45 |
| Zm00001d030750_P001 | Maize | nucleus, plastid | 36.78 | 43.84 |
| GSMUA_Achr9P28300_001 | Banana | nucleus | 34.48 | 43.48 |
| GSMUA_Achr2P16410_001 | Banana | nucleus | 39.08 | 43.04 |
| AT3G55515.1 | Thale cress | nucleus | 39.08 | 43.04 |
| GSMUA_Achr9P03880_001 | Banana | nucleus | 42.53 | 43.02 |
| GSMUA_Achr7P10600_001 | Banana | nucleus | 40.23 | 42.68 |
| HORVU1Hr1G072580.1 | Barley | nucleus, plastid | 35.63 | 42.47 |
| Zm00001d042900_P001 | Maize | plastid | 36.78 | 42.11 |
| KXG23778 | Sorghum | plastid | 39.08 | 40.96 |
| Zm00001d012414_P001 | Maize | cytosol | 34.48 | 40.54 |
| TraesCS5A01G080800.1 | Wheat | plastid | 35.63 | 40.26 |
| GSMUA_Achr6P15210_001 | Banana | cytosol, plastid | 39.08 | 40.0 |
| Os01t0844200-01 | Rice | mitochondrion | 34.48 | 39.47 |
| TraesCS5D01G091800.1 | Wheat | plastid | 34.48 | 39.47 |
| KXG23779 | Sorghum | nucleus | 32.18 | 38.89 |
| Zm00001d041535_P001 | Maize | plastid | 29.89 | 38.81 |
| HORVU5Hr1G020880.1 | Barley | plastid | 33.33 | 38.16 |
| TraesCS5B01G085600.1 | Wheat | plastid | 33.33 | 38.16 |
| TraesCS4A01G096300.1 | Wheat | cytosol | 40.23 | 35.35 |
| TraesCS4B01G208100.1 | Wheat | cytosol, plastid | 39.08 | 34.34 |
| TraesCS4D01G209000.1 | Wheat | cytosol | 39.08 | 34.34 |
| Zm00001d028598_P001 | Maize | cytosol | 37.93 | 33.33 |
| HORVU4Hr1G059950.1 | Barley | cytosol | 37.93 | 32.35 |
| Zm00001d047820_P001 | Maize | cytosol, mitochondrion, nucleus | 36.78 | 32.32 |
| Os03t0272900-02 | Rice | cytosol | 35.63 | 31.63 |
| Os05t0458200-01 | Rice | nucleus | 31.03 | 31.03 |
| OQU92832 | Sorghum | cytosol, mitochondrion, plastid | 36.78 | 30.19 |
| HORVU3Hr1G086090.1 | Barley | cytosol, plastid | 36.78 | 29.91 |
| GSMUA_Achr5P28710_001 | Banana | plastid | 40.23 | 25.93 |
| GSMUA_Achr11P... | Banana | cytosol | 34.48 | 24.0 |
Protein Annotations
| MapMan:11.10.1.6.1 | EntrezGene:818554 | UniProt:A0A178VQG8 | ProteinID:AAM14893.1 | ProteinID:AEC09709.1 | EMBL:AK117621 |
| ArrayExpress:AT2G39705 | EnsemblPlantsGene:AT2G39705 | RefSeq:AT2G39705 | TAIR:AT2G39705 | RefSeq:AT2G39705-TAIR-G | EnsemblPlants:AT2G39705.1 |
| TAIR:AT2G39705.1 | EMBL:AY086777 | EMBL:BK001754 | EMBL:BT005173 | InterPro:DVL | GO:GO:0007275 |
| GO:GO:0008150 | GO:GO:0048367 | RefSeq:NP_565910.1 | ProteinID:OAP08034.1 | PFAM:PF08137 | PO:PO:0000013 |
| PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
| PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 |
| PANTHER:PTHR33102 | PANTHER:PTHR33102:SF9 | UniProt:Q8S8S3 | Symbol:RTFL8 | UniParc:UPI000000C56C | SEG:seg |
Description
RTFL8RTFL8 [Source:UniProtKB/TrEMBL;Acc:A0A178VQG8]
Coordinates
chr2:+:16556801..16558268
Molecular Weight (calculated)
9889.9 Da
IEP (calculated)
11.183
GRAVY (calculated)
-0.678
Length
87 amino acids
Sequence
(BLAST)
(BLAST)
1: MASSSSLTRS GSVHLDEKWK LSKKDGGASR ITRSSSTSSS SFNGKKQGRC AFTRKCARLV KEQRARFYIM RRCVIMLICW RDNYSDS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.