Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 2
- peroxisome 1
- cytosol 1
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY08216 | Canola | nucleus | 86.27 | 93.9 |
| CDY51405 | Canola | nucleus | 29.69 | 83.46 |
| CDY61477 | Canola | nucleus, plastid | 69.47 | 82.39 |
| CDY02487 | Canola | nucleus, plastid | 68.63 | 79.55 |
| AT1G54060.1 | Thale cress | nucleus | 73.67 | 68.67 |
| CDY33093 | Canola | cytosol, plastid | 66.95 | 54.69 |
| CDY33246 | Canola | nucleus | 37.82 | 44.12 |
| CDY39099 | Canola | nucleus | 38.1 | 42.9 |
| CDX75751 | Canola | nucleus | 43.42 | 41.67 |
| CDY39101 | Canola | nucleus, plastid | 35.57 | 41.64 |
| Solyc03g122030.1.1 | Tomato | nucleus | 40.34 | 39.67 |
| VIT_09s0002g00720.t01 | Wine grape | nucleus | 38.94 | 38.19 |
| PGSC0003DMT400088401 | Potato | nucleus, plastid | 39.78 | 38.07 |
| KRH06239 | Soybean | nucleus | 39.22 | 37.84 |
| KRH47662 | Soybean | nucleus, plastid | 38.66 | 37.5 |
| CDY36316 | Canola | nucleus | 25.49 | 36.11 |
| CDY00995 | Canola | nucleus | 24.65 | 34.38 |
| CDX70144 | Canola | cytosol | 23.81 | 34.0 |
| GSMUA_Achr8P23650_001 | Banana | nucleus | 29.13 | 30.5 |
| CDX71939 | Canola | nucleus, plastid | 25.49 | 30.23 |
| GSMUA_Achr9P14340_001 | Banana | nucleus | 29.41 | 29.01 |
| CDX67755 | Canola | nucleus | 25.49 | 28.8 |
| CDX98311 | Canola | nucleus | 24.93 | 28.53 |
| CDX98849 | Canola | cytosol | 24.09 | 28.01 |
| TraesCS6A01G198600.1 | Wheat | nucleus, plastid | 28.57 | 27.57 |
| CDX93016 | Canola | nucleus | 14.57 | 26.26 |
| HORVU6Hr1G050140.1 | Barley | nucleus, plastid | 30.25 | 25.84 |
| GSMUA_Achr3P05880_001 | Banana | nucleus | 29.13 | 25.74 |
| Zm00001d003549_P001 | Maize | nucleus | 27.73 | 25.71 |
| TraesCS6B01G230000.1 | Wheat | nucleus | 29.69 | 25.48 |
| Os04t0445600-00 | Rice | nucleus | 29.69 | 25.42 |
| Os02t0565000-01 | Rice | nucleus | 29.41 | 25.06 |
| Zm00001d016876_P001 | Maize | nucleus, plastid | 28.01 | 24.88 |
| TraesCS6D01G184500.2 | Wheat | nucleus | 28.85 | 24.76 |
| EES12241 | Sorghum | nucleus | 28.29 | 24.75 |
| Zm00001d025514_P001 | Maize | nucleus | 27.17 | 24.74 |
| KXG30464 | Sorghum | nucleus, plastid | 28.29 | 23.93 |
| TraesCS2D01G311800.1 | Wheat | nucleus, plastid | 27.45 | 23.73 |
| TraesCS2A01G313300.1 | Wheat | nucleus, plastid | 27.45 | 23.56 |
| TraesCS2B01G332100.1 | Wheat | nucleus, plastid | 27.17 | 23.32 |
| Zm00001d010753_P001 | Maize | nucleus | 21.01 | 22.87 |
| CDX94808 | Canola | nucleus | 18.77 | 20.87 |
| HORVU2Hr1G077940.1 | Barley | cytosol, nucleus, plastid | 9.8 | 15.62 |
| Zm00001d042917_P001 | Maize | golgi, plasma membrane | 22.69 | 12.2 |
Protein Annotations
| EnsemblPlants:CDY26148 | EnsemblPlantsGene:GSBRNA2T00034800001 | ncoils:Coil | PANTHER:PTHR31307 | PFAM:PF13837 | ProteinID:CDY26148 |
| ProteinID:CDY26148.1 | SEG:seg | UniParc:UPI0004EBE245 | UniProt:A0A078GNF1 | MapMan:15.5.20 | : |
Description
BnaC06g10480DBnaC06g10480D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GNF1]
Coordinates
chrLK032185:-:571172..572473
Molecular Weight (calculated)
39371.7 Da
IEP (calculated)
9.321
GRAVY (calculated)
-0.836
Length
357 amino acids
Sequence
(BLAST)
(BLAST)
001: MEEEDETRSP KSPGDSLSPA PSSPPPILPT SDVTVASATK PPQSPSRNAL ALVVHTPSVV GGSRNGRSGG GRDDCWSEEA TKVLIEAWGE RFSEPGKGTL
101: KQQQWKEVAE VVNESRQCKY LKTDVQCKNR IDTVKKKYKQ EKAKVASGDG PSKWVFFKKL EALIGAGGGK APMGRRQGNK GTVLKRGSDS MKWHFRKRSA
201: SETESESDPE PEASPPDSAE SLPPPPPSQL VSKRLKMDEL GGSGVGDVAK AILGFTEAYE KAETAKLKLM LELEKERMKF VKEMELQRMQ FLKTQMEITQ
301: NHREEERSKP RINDDDDDRN VKNNGDNSDH HHAVAVVVVV VVMLSCLKQL ANKKTKL
101: KQQQWKEVAE VVNESRQCKY LKTDVQCKNR IDTVKKKYKQ EKAKVASGDG PSKWVFFKKL EALIGAGGGK APMGRRQGNK GTVLKRGSDS MKWHFRKRSA
201: SETESESDPE PEASPPDSAE SLPPPPPSQL VSKRLKMDEL GGSGVGDVAK AILGFTEAYE KAETAKLKLM LELEKERMKF VKEMELQRMQ FLKTQMEITQ
301: NHREEERSKP RINDDDDDRN VKNNGDNSDH HHAVAVVVVV VVMLSCLKQL ANKKTKL
001: MEDDDEIQSI PSPGDSSLSP QAPPSPPILP TNDVTVAVVK KPQPGLSSQS PSMNALALVV HTPSVTGGGG SGNRNGRGGG GGSGGGGGGR DDCWSEEATK
101: VLIEAWGDRF SEPGKGTLKQ QHWKEVAEIV NKSRQCKYPK TDIQCKNRID TVKKKYKQEK AKIASGDGPS KWVFFKKLES LIGGTTTFIA SSKASEKAPM
201: GGALGNSRSS MFKRQTKGNQ IVQQQQEKRG SDSMRWHFRK RSASETESES DPEPEASPEE SAESLPPLQP IQPLSFHMPK RLKVDKSGGG GSGVGDVARA
301: ILGFTEAYEK AETAKLKLMA ELEKERMKFA KEMELQRMQF LKTQLEITQN NQEEEERSRQ RGERRIVDDD DDRNGKNNGN VSS
101: VLIEAWGDRF SEPGKGTLKQ QHWKEVAEIV NKSRQCKYPK TDIQCKNRID TVKKKYKQEK AKIASGDGPS KWVFFKKLES LIGGTTTFIA SSKASEKAPM
201: GGALGNSRSS MFKRQTKGNQ IVQQQQEKRG SDSMRWHFRK RSASETESES DPEPEASPEE SAESLPPLQP IQPLSFHMPK RLKVDKSGGG GSGVGDVARA
301: ILGFTEAYEK AETAKLKLMA ELEKERMKFA KEMELQRMQF LKTQLEITQN NQEEEERSRQ RGERRIVDDD DDRNGKNNGN VSS
Arabidopsis Description
ASIL1Trihelix transcription factor ASIL1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SYG2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.