Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- plastid 3
- cytosol 1
- nucleus 2
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G332100.1 | Wheat | nucleus, plastid | 99.03 | 98.32 |
| TraesCS2A01G313300.1 | Wheat | nucleus, plastid | 98.06 | 97.36 |
| HORVU2Hr1G077940.1 | Barley | cytosol, nucleus, plastid | 50.61 | 93.3 |
| Os04t0445600-00 | Rice | nucleus | 73.37 | 72.66 |
| Zm00001d025514_P001 | Maize | nucleus | 67.8 | 71.43 |
| EES12241 | Sorghum | nucleus | 69.73 | 70.59 |
| Zm00001d003549_P001 | Maize | nucleus | 64.16 | 68.83 |
| TraesCS6D01G184500.2 | Wheat | nucleus | 58.11 | 57.69 |
| VIT_09s0002g00720.t01 | Wine grape | nucleus | 35.59 | 40.38 |
| KRH06239 | Soybean | nucleus | 35.35 | 39.46 |
| GSMUA_Achr8P23650_001 | Banana | nucleus | 32.2 | 39.0 |
| CDY33246 | Canola | nucleus | 28.81 | 38.89 |
| KRH47662 | Soybean | nucleus, plastid | 34.62 | 38.86 |
| CDY39099 | Canola | nucleus | 29.54 | 38.49 |
| CDY39101 | Canola | nucleus, plastid | 28.09 | 38.03 |
| Bra021536.1-P | Field mustard | nucleus | 27.84 | 37.58 |
| Bra021534.1-P | Field mustard | nucleus, plastid | 27.84 | 37.1 |
| GSMUA_Achr9P14340_001 | Banana | nucleus | 32.45 | 37.02 |
| Solyc03g122030.1.1 | Tomato | nucleus | 32.2 | 36.64 |
| PGSC0003DMT400088401 | Potato | nucleus, plastid | 32.2 | 35.66 |
| GSMUA_Achr3P05880_001 | Banana | nucleus | 33.66 | 34.41 |
| CDX75751 | Canola | nucleus | 30.75 | 34.14 |
| TraesCS3D01G271000.1 | Wheat | nucleus | 25.91 | 33.65 |
| Bra037960.1-P | Field mustard | nucleus, plastid | 24.21 | 33.22 |
| CDY61477 | Canola | nucleus, plastid | 23.73 | 32.56 |
| CDY02487 | Canola | nucleus, plastid | 23.97 | 32.14 |
| AT3G14180.1 | Thale cress | nucleus | 33.41 | 31.15 |
| Bra014370.1-P | Field mustard | nucleus | 24.94 | 30.75 |
| CDY08216 | Canola | nucleus | 24.21 | 30.49 |
| TraesCS1D01G400500.1 | Wheat | nucleus | 25.42 | 29.75 |
| AT1G54060.1 | Thale cress | nucleus | 26.39 | 28.46 |
| CDY26148 | Canola | nucleus, plastid | 23.73 | 27.45 |
| CDY51405 | Canola | nucleus | 8.23 | 26.77 |
| TraesCS3D01G246100.1 | Wheat | nucleus, plastid | 18.64 | 24.37 |
| CDY33093 | Canola | cytosol, plastid | 24.94 | 23.57 |
| Bra030909.1-P | Field mustard | nucleus | 7.26 | 23.44 |
Protein Annotations
| EnsemblPlants:TraesCS2D01G311800.1 | EnsemblPlantsGene:TraesCS2D01G311800 | ncoils:Coil | PANTHER:PTHR31307 | PANTHER:PTHR31307:SF12 | PFAM:PF13837 |
| SEG:seg | MapMan:15.5.20 | : | : | : | : |
Description
No Description!
Coordinates
chr2D:-:401113182..401114423
Molecular Weight (calculated)
44678.1 Da
IEP (calculated)
6.585
GRAVY (calculated)
-0.923
Length
413 amino acids
Sequence
(BLAST)
(BLAST)
001: MDDDDNSPSP SLSPASSSPL PVASALPVAD PVTVASAPPG GPLTLALPIQ KHGSYPSHGG GGGGGGGRED AWSEGATSAL IDAWGERFVA LGRGSLRHPQ
101: WQEVAEAVSS RDNYSKAPKS DVQCKNRIDT LKKKYKIERA KPVSSWQFYD RLDVLLAPTY NQKPAAHPNG RNAVPTALRA GFPQRSRTPL MPASAPVKRR
201: APSPELSASS ESSDGFPPEP ALPAANGKRR RTDEGRVDGF SGGDRSQGMR ELAQAIRRFG EAYERVETAK LEQAAETERQ RLDFARELES QRVQFFLNTQ
301: KELSQGKSHI SPAAAASHSQ VGAATVGGSS RRMASVPDST SRRMAPFPDA RTSSNHHDRY RASDGSRHHH RPALRPHYQY HESNMADSAA ASDGEQSDEE
401: EEEEDDDNEE ESQ
101: WQEVAEAVSS RDNYSKAPKS DVQCKNRIDT LKKKYKIERA KPVSSWQFYD RLDVLLAPTY NQKPAAHPNG RNAVPTALRA GFPQRSRTPL MPASAPVKRR
201: APSPELSASS ESSDGFPPEP ALPAANGKRR RTDEGRVDGF SGGDRSQGMR ELAQAIRRFG EAYERVETAK LEQAAETERQ RLDFARELES QRVQFFLNTQ
301: KELSQGKSHI SPAAAASHSQ VGAATVGGSS RRMASVPDST SRRMAPFPDA RTSSNHHDRY RASDGSRHHH RPALRPHYQY HESNMADSAA ASDGEQSDEE
401: EEEEDDDNEE ESQ
001: METTPETQSK THRLPAGRED WWSEDATATL IEAWGDRYVN LNRGNLRQND WKEVADAVNS SHGNGRPKTD VQCKNRIDTL KKKYKTEKAK PLSNWCFFDR
101: LDFLIGPVMK KSSGAVVKSA LMNPNLNPTG SKSTGSSLDD DDDDDDDDEE DDDDAGDWGF VVRKHRKVED VDSSEGSAFR ELARSILKLG EAFERIEGKK
201: QQMMIELEKQ RMEVAKELEL QRMNMLMEMQ LELEKSKLGK RRAASGKKL
101: LDFLIGPVMK KSSGAVVKSA LMNPNLNPTG SKSTGSSLDD DDDDDDDDEE DDDDAGDWGF VVRKHRKVED VDSSEGSAFR ELARSILKLG EAFERIEGKK
201: QQMMIELEKQ RMEVAKELEL QRMNMLMEMQ LELEKSKLGK RRAASGKKL
Arabidopsis Description
AT3g11100/F11B9_105 [Source:UniProtKB/TrEMBL;Acc:Q8VZI9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.