Factsheet for TraesCS4D01G205400.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	secretory
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G204500.1	Wheat	golgi, plastid	99.05	99.05
TraesCS4A01G099800.1	Wheat	plastid	98.58	98.58
HORVU4Hr1G058970.6	Barley	plastid	99.05	88.94
Os03t0278900-01	Rice	plastid	81.04	81.04
GSMUA_Achr8P22550_001	Banana	endoplasmic reticulum, vacuole	45.02	79.17
EER92459	Sorghum	plastid	77.73	76.64
Zm00001d047789_P001	Maize	plastid	77.25	75.46
KRH61755	Soybean	plastid	56.4	55.35
KRH52420	Soybean	plastid	55.92	54.88
VIT_04s0008g05590.t01	Wine grape	plastid	53.55	52.56
PGSC0003DMT400052738	Potato	plastid	55.45	52.47
PGSC0003DMT400052777	Potato	plastid	55.45	52.47
Solyc06g066000.1.1	Tomato	plastid	55.45	52.47
AT4G32260.1	Thale cress	plastid	54.03	52.05
Solyc06g065990.1.1	Tomato	nucleus, plastid	54.5	51.57
CDX68826	Canola	plastid	52.13	50.93
CDX75228	Canola	plastid	52.13	49.77
Bra011329.1-P	Field mustard	plastid	52.13	49.77

Protein Annotations

MapMan:1.1.9.1.3	InterPro:ATP_synth_b'	InterPro:ATP_synth_b/b'su_bac/chlpt	ncoils:Coil	GO:GO:0003674	GO:GO:0005215
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006139	GO:GO:0006810	GO:GO:0006950	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009507	GO:GO:0009534	GO:GO:0009535	GO:GO:0009536	GO:GO:0009579	GO:GO:0009605
GO:GO:0009607	GO:GO:0009719	GO:GO:0009735	GO:GO:0009941	GO:GO:0009987	GO:GO:0015078
GO:GO:0015986	GO:GO:0016020	GO:GO:0019904	GO:GO:0042742	GO:GO:0045263	HAMAP:MF_01398
HAMAP:MF_01399	PFAM:PF00430	PANTHER:PTHR33445	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS4D01G205400	EnsemblPlants:TraesCS4D01G205400.1
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr4D:+:352807990..352808625

Molecular Weight (calculated)

22496.5 Da

IEP (calculated)

5.188

GRAVY (calculated)

0.047

Length

211 amino acids

Sequence
(BLAST)

001: MATAMMAAAT TSCSPRRALL KPAASSSSAP PPRPQPRSFL KQLPGLAATA AAAAVASVPL PALAVEMEKA ALFDFNLTLP AITIEFLLLM VALDKLYFSP
101: LGKFMDERDA KIRAELGGVK DASEEVRQLE EQAQAILKAA RAEIAAALNK MKKETTTELE AKLDEGRRRV EAELVEALAS LEGQKEEAIK ALDAQIVSLS
201: DEIVKKVLPS A

Best Arabidopsis Sequence Match ( AT4G32260.1 )
(BLAST)

001: MAANSIMASS KPLISLSSNQ QPNRVQIPKF AKLPQIPKSL TSSTDLRSKA LSLSSATAKS LALIAAFAPP SMAEAMEKAQ LFDFNLTLPI IVVEFLFLMF
101: ALDKVYYSPL GNFMDQRDAS IKEKLASVKD TSTEVKELDE QAAAVMRAAR AEIAAALNKM KKETQVEVEE KLAEGRKKVE EELKEALASL ESQKEETIKA
201: LDSQIAALSE DIVKKVLPS

Arabidopsis Description

PDE334 [Source:UniProtKB/TrEMBL;Acc:A0A178V017]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.