Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, vacuole
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 2
- extracellular 4
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 4
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os03t0278900-01 | Rice | plastid | 80.0 | 45.5 |
| KRH52420 | Soybean | plastid | 80.83 | 45.12 |
| KRH61755 | Soybean | plastid | 80.83 | 45.12 |
| TraesCS4D01G205400.1 | Wheat | plastid | 79.17 | 45.02 |
| TraesCS4B01G204500.1 | Wheat | golgi, plastid | 79.17 | 45.02 |
| TraesCS4A01G099800.1 | Wheat | plastid | 79.17 | 45.02 |
| Zm00001d047789_P001 | Maize | plastid | 80.83 | 44.91 |
| EER92459 | Sorghum | plastid | 80.0 | 44.86 |
| VIT_04s0008g05590.t01 | Wine grape | plastid | 75.83 | 42.33 |
| PGSC0003DMT400052777 | Potato | plastid | 76.67 | 41.26 |
| Solyc06g066000.1.1 | Tomato | plastid | 76.67 | 41.26 |
| PGSC0003DMT400052738 | Potato | plastid | 75.83 | 40.81 |
| Solyc06g065990.1.1 | Tomato | nucleus, plastid | 75.83 | 40.81 |
| HORVU4Hr1G058970.6 | Barley | plastid | 79.17 | 40.43 |
| AT4G32260.1 | Thale cress | plastid | 72.5 | 39.73 |
| CDX68826 | Canola | plastid | 70.83 | 39.35 |
| CDX75228 | Canola | plastid | 71.67 | 38.91 |
| Bra011329.1-P | Field mustard | plastid | 71.67 | 38.91 |
Protein Annotations
| MapMan:1.1.9.1.3 | InterPro:ATP_synth_b/b'su_bac/chlpt | ncoils:Coil | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006139 |
| GO:GO:0006810 | GO:GO:0006811 | GO:GO:0006950 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009507 | GO:GO:0009534 | GO:GO:0009535 | GO:GO:0009536 | GO:GO:0009579 | GO:GO:0009605 |
| GO:GO:0009607 | GO:GO:0009719 | GO:GO:0009735 | GO:GO:0009941 | GO:GO:0009987 | GO:GO:0015078 |
| GO:GO:0015986 | GO:GO:0015992 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0019904 | GO:GO:0042742 |
| GO:GO:0045263 | EnsemblPlantsGene:GSMUA_Achr8G22550_001 | EnsemblPlants:GSMUA_Achr8P22550_001 | EnsemblPlants:GSMUA_Achr8T22550_001 | UniProt:M0TSQ8 | PFAM:PF00430 |
| PANTHER:PTHR33445 | TMHMM:TMhelix | UniParc:UPI00029500DD | SEG:seg | : | : |
Description
ATP synthase subunit b', chloroplastic [Source:GMGC_GENE;Acc:GSMUA_Achr8G22550_001]
Coordinates
chr8:+:27101913..27102488
Molecular Weight (calculated)
13407.4 Da
IEP (calculated)
4.678
GRAVY (calculated)
-0.049
Length
120 amino acids
Sequence
(BLAST)
(BLAST)
001: MEKAALFDFN LTLPAIAIEF LLLMVALDKI YFTPLGKFMD ERDAAIRAKL SDISAALNQM KKESSAELEQ KLAEGRKRVE AELAEALQNL ERQKEETIKA
101: LDSQIAALSD EIVKKVLPTV
101: LDSQIAALSD EIVKKVLPTV
001: MAANSIMASS KPLISLSSNQ QPNRVQIPKF AKLPQIPKSL TSSTDLRSKA LSLSSATAKS LALIAAFAPP SMAEAMEKAQ LFDFNLTLPI IVVEFLFLMF
101: ALDKVYYSPL GNFMDQRDAS IKEKLASVKD TSTEVKELDE QAAAVMRAAR AEIAAALNKM KKETQVEVEE KLAEGRKKVE EELKEALASL ESQKEETIKA
201: LDSQIAALSE DIVKKVLPS
101: ALDKVYYSPL GNFMDQRDAS IKEKLASVKD TSTEVKELDE QAAAVMRAAR AEIAAALNKM KKETQVEVEE KLAEGRKKVE EELKEALASL ESQKEETIKA
201: LDSQIAALSE DIVKKVLPS
Arabidopsis Description
PDE334 [Source:UniProtKB/TrEMBL;Acc:A0A178V017]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.