Factsheet for HORVU4Hr1G058970.6

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
TargetP:	plastid
YLoc:	plastid

plastid: 16758444
plastid: 17675669

msms PMID: 16758444 doi

B Granvogl, V Reisinger, LA Eichacker

Department für Biologie I, Ludwig-Maximilians-Universität, München, Germany.

msms PMID: 17675669 doi

S Frigerio, C Campoli, S Zorzan, LI Fantoni, C Crosatti, F Drepper, W Haehnel, L Cattivelli, T Morosinotto, R Bassi

LGBP, UMR 6191 CEA-CNRS-Université de la Méditerranée, Marseille 13288, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G205400.1	Wheat	plastid	88.94	99.05
TraesCS4B01G204500.1	Wheat	golgi, plastid	88.94	99.05
TraesCS4A01G099800.1	Wheat	plastid	87.66	97.63
Os03t0278900-01	Rice	plastid	72.77	81.04
GSMUA_Achr8P22550_001	Banana	endoplasmic reticulum, vacuole	40.43	79.17
EER92459	Sorghum	plastid	69.79	76.64
Zm00001d047789_P001	Maize	plastid	69.36	75.46
KRH61755	Soybean	plastid	50.64	55.35
KRH52420	Soybean	plastid	50.21	54.88
VIT_04s0008g05590.t01	Wine grape	plastid	48.09	52.56
PGSC0003DMT400052738	Potato	plastid	49.79	52.47
Solyc06g066000.1.1	Tomato	plastid	49.79	52.47
PGSC0003DMT400052777	Potato	plastid	49.79	52.47
AT4G32260.1	Thale cress	plastid	48.51	52.05
Solyc06g065990.1.1	Tomato	nucleus, plastid	48.94	51.57
CDX68826	Canola	plastid	46.81	50.93
CDX75228	Canola	plastid	46.81	49.77
Bra011329.1-P	Field mustard	plastid	46.81	49.77

Protein Annotations

MapMan:1.1.9.1.3	UniProt:A0A287P7W3	InterPro:ATP_synth_b'	InterPro:ATP_synth_b/b'su_bac/chlpt	ncoils:Coil	GO:GO:0003674
GO:GO:0005215	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0006139	GO:GO:0006810	GO:GO:0006811	GO:GO:0006950	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009507	GO:GO:0009534	GO:GO:0009535	GO:GO:0009536
GO:GO:0009579	GO:GO:0009605	GO:GO:0009607	GO:GO:0009719	GO:GO:0009735	GO:GO:0009941
GO:GO:0009987	GO:GO:0015078	GO:GO:0015986	GO:GO:0016020	GO:GO:0016021	GO:GO:0019904
GO:GO:0042742	GO:GO:0045263	EnsemblPlantsGene:HORVU4Hr1G058970	EnsemblPlants:HORVU4Hr1G058970.6	HAMAP:MF_01398	HAMAP:MF_01399
PFAM:PF00430	PANTHER:PTHR33445	TMHMM:TMhelix	UniParc:UPI000B4778D5	SEG:seg	:

Description

No Description!

Coordinates

chrchr4H:+:492194228..492258095

Molecular Weight (calculated)

25011.5 Da

IEP (calculated)

7.521

GRAVY (calculated)

-0.053

Length

235 amino acids

Sequence
(BLAST)

001: PPPPPHTATT RLTTAPLPPP SHPPMATAMM AAATTSCSPR RALLKPVASS SSAPPPRPQP RSFLKQLPGL AATAAAAAVA SVPLPALAVE MEKAALFDFN
101: LTLPAITIEF LLLMVALDKL YFSPLGKFMD ERDAKIRAEL GGVKDASEEV RQLEEQAQAI LKAARAEIAA ALNKMKKETT KELEAKLDEG RRRVEAELVE
201: ALASLEGQKE EAIKALDAQI VSLSDEIVKK VLPSA

Best Arabidopsis Sequence Match ( AT4G32260.1 )
(BLAST)

001: MAANSIMASS KPLISLSSNQ QPNRVQIPKF AKLPQIPKSL TSSTDLRSKA LSLSSATAKS LALIAAFAPP SMAEAMEKAQ LFDFNLTLPI IVVEFLFLMF
101: ALDKVYYSPL GNFMDQRDAS IKEKLASVKD TSTEVKELDE QAAAVMRAAR AEIAAALNKM KKETQVEVEE KLAEGRKKVE EELKEALASL ESQKEETIKA
201: LDSQIAALSE DIVKKVLPS

Arabidopsis Description

PDE334 [Source:UniProtKB/TrEMBL;Acc:A0A178V017]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.