Factsheet for Zm00001d047789_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER92459	Sorghum	plastid	92.13	92.99
GSMUA_Achr8P22550_001	Banana	endoplasmic reticulum, vacuole	44.91	80.83
Os03t0278900-01	Rice	plastid	77.78	79.62
TraesCS4B01G204500.1	Wheat	golgi, plastid	75.93	77.73
TraesCS4D01G205400.1	Wheat	plastid	75.46	77.25
TraesCS4A01G099800.1	Wheat	plastid	75.0	76.78
HORVU4Hr1G058970.6	Barley	plastid	75.46	69.36
KRH52420	Soybean	plastid	56.48	56.74
KRH61755	Soybean	plastid	56.02	56.28
VIT_04s0008g05590.t01	Wine grape	plastid	52.78	53.02
AT4G32260.1	Thale cress	plastid	53.7	52.97
PGSC0003DMT400052738	Potato	plastid	54.63	52.91
PGSC0003DMT400052777	Potato	plastid	54.63	52.91
Solyc06g066000.1.1	Tomato	plastid	54.63	52.91
Solyc06g065990.1.1	Tomato	nucleus, plastid	54.17	52.47
CDX68826	Canola	plastid	51.39	51.39
CDX75228	Canola	plastid	51.39	50.23
Bra011329.1-P	Field mustard	plastid	51.39	50.23

Protein Annotations

MapMan:1.1.9.1.3	ProteinID:AQL07616.1	InterPro:ATP_synth_b'	InterPro:ATP_synth_b/b'su_bac/chlpt	ncoils:Coil	GO:GO:0003674
GO:GO:0005215	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0006139	GO:GO:0006810	GO:GO:0006811	GO:GO:0006950	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009507	GO:GO:0009534	GO:GO:0009535	GO:GO:0009536
GO:GO:0009579	GO:GO:0009605	GO:GO:0009607	GO:GO:0009719	GO:GO:0009735	GO:GO:0009941
GO:GO:0009987	GO:GO:0015078	GO:GO:0015986	GO:GO:0015992	GO:GO:0016020	GO:GO:0016021
GO:GO:0019904	GO:GO:0042742	GO:GO:0045263	UniProt:K7VN08	HAMAP:MF_01398	HAMAP:MF_01399
PFAM:PF00430	PANTHER:PTHR33445	TMHMM:TMhelix	UniParc:UPI000220D3FE	EnsemblPlantsGene:Zm00001d047789	EnsemblPlants:Zm00001d047789_P001
EnsemblPlants:Zm00001d047789_T001	SEG:seg	:	:	:	:

Description

ATP synthase B chain

Coordinates

chr9:+:141793484..141794134

Molecular Weight (calculated)

22716.5 Da

IEP (calculated)

5.182

GRAVY (calculated)

0.029

Length

216 amino acids

Sequence
(BLAST)

001: MATALMVAAT TSCSPGRAAP RLKPVASSSS SSSSSSARPR RPLAQQLPRL LATAAAAAAV AAAPLPALAE QMEKAALFDF NLTLPAIATE FLLLMVALDK
101: LYFTPLGKFM DERDAKIRGE LGDVKGASEE VKQLEDQAAA IMKAARAEIA AALNKMKKET TAELEAKLDE GRSRVEAELV EALANLEAQK EEAVKALDAQ
201: IASLSDEIVK KVLPSA

Best Arabidopsis Sequence Match ( AT4G32260.1 )
(BLAST)

001: MAANSIMASS KPLISLSSNQ QPNRVQIPKF AKLPQIPKSL TSSTDLRSKA LSLSSATAKS LALIAAFAPP SMAEAMEKAQ LFDFNLTLPI IVVEFLFLMF
101: ALDKVYYSPL GNFMDQRDAS IKEKLASVKD TSTEVKELDE QAAAVMRAAR AEIAAALNKM KKETQVEVEE KLAEGRKKVE EELKEALASL ESQKEETIKA
201: LDSQIAALSE DIVKKVLPS

Arabidopsis Description

PDE334 [Source:UniProtKB/TrEMBL;Acc:A0A178V017]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.