CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 10
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
EpiLoc:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Plant-mPloc:	plastid
Predotar:	plastid
PProwler:	secretory
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra011329.1-P	Field mustard	plastid	100.0	100.0
CDX68826	Canola	plastid	95.48	97.69
AT4G32260.1	Thale cress	plastid	85.97	86.76
GSMUA_Achr8P22550_001	Banana	endoplasmic reticulum, vacuole	38.91	71.67
Solyc06g066000.1.1	Tomato	plastid	65.16	64.57
PGSC0003DMT400052777	Potato	plastid	65.16	64.57
VIT_04s0008g05590.t01	Wine grape	plastid	62.44	64.19
PGSC0003DMT400052738	Potato	plastid	64.71	64.13
Solyc06g065990.1.1	Tomato	nucleus, plastid	64.71	64.13
KRH61755	Soybean	plastid	59.28	60.93
KRH52420	Soybean	plastid	57.92	59.53
EER92459	Sorghum	plastid	51.58	53.27
TraesCS4A01G099800.1	Wheat	plastid	50.23	52.61
TraesCS4B01G204500.1	Wheat	golgi, plastid	50.23	52.61
TraesCS4D01G205400.1	Wheat	plastid	49.77	52.13
Os03t0278900-01	Rice	plastid	49.32	51.66
Zm00001d047789_P001	Maize	plastid	50.23	51.39
HORVU4Hr1G058970.6	Barley	plastid	49.77	46.81

Protein Annotations

MapMan:1.1.9.1.3	GO:A0A078CJH5	InterPro:ATP_synth_b'	InterPro:ATP_synth_b/b'su_bac/chlpt	EnsemblPlants:CDX75228	ProteinID:CDX75228
ProteinID:CDX75228.1	ncoils:Coil	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0006139	GO:GO:0006810	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0015078	GO:GO:0015986	GO:GO:0016020	GO:GO:0045263	EnsemblPlantsGene:GSBRNA2T00121082001
HAMAP:MF_01398	HAMAP:MF_01399	PFAM:PF00430	PANTHER:PTHR33445	TMHMM:TMhelix	UniParc:UPI0002546618
SEG:seg	:	:	:	:	:

Description

BnaA01g04740D

Coordinates

chrLK031804:+:202129..203243

Molecular Weight (calculated)

23846.0 Da

IEP (calculated)

8.848

GRAVY (calculated)

-0.008

Length

221 amino acids

Sequence
(BLAST)

001: MANSIMASSK PLISLSSSTQ PTRVNLPKSI KLPQIPKPIS SSSSSSSLSS KALSFSSATV KSLALIAALA PPSMAEAMEK AQLFDFNLTL PIIVVEFLFL
101: MFALDKVYYS PLGNFMDKRD GEIKEKLASV KDTSTEVKAL DEQAAAVMRA ARAEIAAALN KMKKETEVEV EQQLAVGRKK VEAELQEALA SLEKQKEETI
201: KALDSQIAAL SEDIVKKVLP S

Best Arabidopsis Sequence Match ( AT4G32260.1 )
(BLAST)

001: MAANSIMASS KPLISLSSNQ QPNRVQIPKF AKLPQIPKSL TSSTDLRSKA LSLSSATAKS LALIAAFAPP SMAEAMEKAQ LFDFNLTLPI IVVEFLFLMF
101: ALDKVYYSPL GNFMDQRDAS IKEKLASVKD TSTEVKELDE QAAAVMRAAR AEIAAALNKM KKETQVEVEE KLAEGRKKVE EELKEALASL ESQKEETIKA
201: LDSQIAALSE DIVKKVLPS

Arabidopsis Description

PDE334 [Source:UniProtKB/TrEMBL;Acc:A0A178V017]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.